Tag | Content |
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EnhancerAtlas ID | HS176-35825 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr6:148829420-148831660 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
NFYA | MA0060.3 | chr6:148830352-148830363 | TCTGATTGGCT | - | 6.32 | RFX1 | MA0509.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | - | 6.33 | RFX1 | MA0509.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | + | 6.3 | RFX2 | MA0600.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | - | 6.76 | RFX2 | MA0600.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | + | 6.78 | RFX5 | MA0510.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | - | 6.78 | RFX5 | MA0510.2 | chr6:148831245-148831261 | TGTTGCTATGGAAACC | + | 6.88 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_00189 | chr6:148827351-148833077 | Adipose_Nuclei | SE_02400 | chr6:148828643-148831690 | Astrocytes | SE_03233 | chr6:148828664-148831578 | Brain_Angular_Gyrus | SE_04018 | chr6:148827701-148831786 | Brain_Anterior_Caudate | SE_04985 | chr6:148827628-148833079 | Brain_Cingulate_Gyrus | SE_06000 | chr6:148827366-148831776 | Brain_Hippocampus_Middle | SE_06894 | chr6:148827671-148832923 | Brain_Hippocampus_Middle_150 | SE_07883 | chr6:148827633-148832017 | Brain_Inferior_Temporal_Lobe | SE_08885 | chr6:148829946-148831197 | Brain_Mid_Frontal_Lobe | SE_26315 | chr6:148827595-148831798 | Duodenum_Smooth_Muscle | SE_29728 | chr6:148827825-148833246 | Fetal_Muscle | SE_37474 | chr6:148828460-148832072 | HSMMtube | SE_38980 | chr6:148828338-148831308 | IMR90 | SE_44188 | chr6:148827585-148833149 | NHDF-Ad | SE_44870 | chr6:148828547-148832073 | NHLF | SE_45588 | chr6:148827694-148833266 | Osteoblasts | SE_55824 | chr6:148828748-148832801 | u87 | SE_63863 | chr6:148828930-148831799 | HSMM | SE_67837 | chr6:148828748-148832801 | u87 | SE_68262 | chr6:148812529-148851977 | TC32 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr6 | 148829449 | 148830800 | chr6 | 148830800 | 148831449 |
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Enhancer Sequence | GTCTATTTTC AATTGAGACT GCTCCCTTAA GGGGGTGTTC AGAAGAATGT CTGAAAAAGA 60 GATCTTTTTT TAAGTTCAGT CACTTTTAAG GGTTAGTCCT TGTCCTCCTT GTCCTGGATT 120 TGCTCAGATT CTCGCGTTCT TTTTTCTGTC TCTGGAATTC CATAGACAGT AATTAAGGAA 180 CTGGAGGCCA GCAGGAGGTC AGGGAGCCTT CCTCAGTGAA AACAGGGATT GTTGGCCATG 240 CACAACACTC CCTTTTTTCC TTGTGGTGAA TAGGAGATTT GCTTAGAGCT GATGACTTAT 300 GCCTTTCTTG CGAGTTATGC AGTTAGCAAG CGACTGGGGA ATCAGTCAGC AAGCAGAAAG 360 AAGCTAATTG AATCCAGTGT CTTCCCCTTT CTCCTTCGGA TACTGAGCTG TGACGGTGGA 420 GCCTGCCTGA TCATGTAACT CCAGAGAGAC ATGTTCCAGG AGTGCCTAAT CTTAATTTTG 480 AGATTGCGGA GTTTGATGCT ACAAGAGTGA AGACGCTCTC CGAGTGGGGA GGGGGGTGGG 540 AGGTACAGGA CGTCTTCAGA ATTACCCCTT AGGCTTGCTA AATGCCGAAG CCGGTAAGTC 600 ACTGAATGCG TTCAATGGGA AAGAAAGAAT GTGTTTTCTG TTGCTTCAAG TAAAAGTTTT 660 TGCTGCTCCT GCCTATGATG TTTCTCTCTC TTTTCTTCTT AAATTCCTCT AGATTTGTCC 720 TTCTTCGCCT GTTTACTTCC CTACCTGGTA ACCCTGAGCA TTTTTGCCTG GCATTTTCAC 780 CAGTGAAAAT GCGTAACTTT TAGAGAATAG TGAGTATTGT TTTGAGAATT TGAGACAATG 840 AGCATATATG GCTCAGCTGT GAATTGTGGA GGCTTTTCCT GGGGAGGACT TGAATTCAGA 900 CAGTGTTGCA CATTGCTTTT CATAAGCTTA TATCTGATTG GCTTCCTTCT CTTAAGTTTA 960 AGATTAACGC TGTGACACAG CCGACCTAGA AAGCTGAAGT ATGTATGTCT AATCATGCGC 1020 TAGGTTAGAG AGACCAGTGT GTGAATTTCA CAGGCAAGTA CATTTCCAGT TTCAAATTGC 1080 TTTTCAGAAA TGTTTAAATA TCTCTCGGTG TTACGTGGCG CTGGGGGAGA TGAGTGGGCT 1140 TAGTCTGGGT GTTAATTGTG ACAGCGTGTC GTGTGTTTCG AGCTAGGGAA ACAAGCTGAG 1200 TGAAAGTGCT TCTGCAGAGG GCACAGTTGT AATCCTGTGA TCAGCGTGGT GGTCTCAAGC 1260 GGTCCTCCAA AGGGTCTAGT TGCTCCTTGC AAATTGGTTT TAACCTTTAT TACAGCATAT 1320 TGCCATTGTG CTTGCACAAC TGTGCCATAT GGCTTTTGGA AAGGATTTGT TCTGCACACT 1380 GCAGTCCCAA GAACTGTTTG TTACAGGGTC CGGTGAAGTA TCTGTTACCG ACCAGCAGTG 1440 ACAGGTTTAC TTGGAGCAGG GAGAGGATGC ATTTAGTGAG CTCCGGCACA CAAATGTTTG 1500 TACTCACAGA TGCTATTCAT TTTGTTCCTT TTTTCTGATC ATCCAGCGTG TAGCTGTGTT 1560 ATAAAAAGTT CTCCACGCTG GCTCCATGTC TTTCCTATTA GAACATTGCA GATGTGTCAA 1620 GGATGCACTT GTTCCAAAAG AAGCTGGGAA GGAAGGAGGC TCCACCCTCC TCCGGGTGCC 1680 AGACGGGCCC CATAGGTTCC TCATTCAGTG GCCTGGCCGG CAAATGGTGT GCTATCTCTT 1740 TAAAGCAGCT ATAGTTTTGT GTCTTGGCTT GGTCAATTTG TTATGGTTTA AAACTGTGGA 1800 GCCAGCTGTC TGCAATCTGA TGTAATGTTG CTATGGAAAC CAGAAATGAA ACACTTAAGC 1860 ATTCACCACA GAATTACTAC ATATAGCATT AGCCAAAGTA ATTAAAAGTT GAGCCATATG 1920 GGCTTTCTGC TGGAAAAAAA TCTGCAGAGG AGAGGCTGGA AATCAAATGT TTCTGTTTAC 1980 AATATTGGAA ATCCACTTTT CCACAATTTT TGGTGGGATA AGTTGCCTTT TTCTCTTGAA 2040 GGTTTTCTGG TGAGGAGCTG TCATACAGAT GATTGAGTTC ACCTTCTCAC TGAGAAGATG 2100 ATCTGTTTAA CTCTGACCCA GGGTGGGACA AGGGAGGGGA GGCCACACTA TCTCATGTTT 2160 GAATGTGTGT GAATATATAC TTTTATTTTT TAACTTTAGT TTAAAACCTG TTCTATAACA 2220 GTGCTGAACC TATTTCTTAG 2240
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