EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-34174

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr6:30457770-30458010

Target genes

Number: 32
Name	Ensembl ID

HCG17	ENSG00000242996
TRIM39	ENSG00000204599
HCG18	ENSG00000231074
RPP21	ENSG00000241370
TMPOP1	ENSG00000229068
SUCLA2P1	ENSG00000224936
RANP1	ENSG00000236603
HLA	ENSG00000204592
XXbac	ENSG00000235781
PRR3	ENSG00000204576
GNL1	ENSG00000204590
ABCF1	ENSG00000204574
MIR877	ENSG00000216101
MRPS18B	ENSG00000204568
PPP1R10	ENSG00000204569
ATAT1	ENSG00000137343
PTMAP1	ENSG00000228415
C6orf136	ENSG00000204564
DHX16	ENSG00000204560
PPP1R18	ENSG00000146112
NRM	ENSG00000137404
RPL7P4	ENSG00000230449
MDC1	ENSG00000224328
TUBB	ENSG00000196230
Y	ENSG00000201988
FLOT1	ENSG00000137312
IER3	ENSG00000137331
HCG20	ENSG00000228022
LINC00243	ENSG00000214894
7SK	ENSG00000202241
TIGD1L	ENSG00000237775
DDR1	ENSG00000204580

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr6:30457971-30457982	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr6:30457972-30457982	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr6:30457970-30457985	CGGGGGCGGGGCTTG	-	6.23
SP2	MA0516.2	chr6:30457969-30457986	ACGGGGGCGGGGCTTGG	-	6.27
SP2	MA0516.2	chr6:30457983-30458000	TGGTGGGCGGGACTGAC	-	6.58
SP4	MA0685.1	chr6:30457968-30457985	GACGGGGGCGGGGCTTG	-	6.63

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_51043	chr6:30456531-30460902	Sigmoid_Colon
SE_53611	chr6:30456489-30459651	Spleen
SE_62602	chr6:30456364-30512797	Tonsil

Enhancer Sequence

CGGTGAGTGA CCCCGGCCAG GGGAGCAGGT CACGACCCCT CCCCATCCCC CACGGACGGC 60
GCGGGTCCCC TCGAATCTTC GGGTCCCAGA TTCACCCCAA GGCTGCGGAA CCCGCCCAGA 120
CCCTAGACCG GGGAGAGTCT CAGGCGCCTT TACCCGGTTC TTTTTCAGTT TAGGCCAAAA 180
TGCCCACAGG GTGGTGGCGA CGGGGGCGGG GCTTGGTGGG CGGGACTGAC TAAGGGGCGG 240