EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-32944

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr5:140914000-140915190

Target genes

Number: 29
Name	Ensembl ID

TAF7	ENSG00000178913
AC005618.1	ENSG00000255729
PCDHGA1	ENSG00000204956
PCDHGA2	ENSG00000081853
PCDHGA3	ENSG00000254245
PCDHGB1	ENSG00000254221
PCDHGA4	ENSG00000262576
PCDHGB2	ENSG00000253910
PCDHGA5	ENSG00000253485
PCDHGB3	ENSG00000262209
PCDHGA6	ENSG00000253731
PCDHGA7	ENSG00000253537
PCDHGB4	ENSG00000253953
PCDHGA8	ENSG00000253767
PCDHGA9	ENSG00000261934
PCDHGB6	ENSG00000253305
PCDHGA10	ENSG00000253846
PCDHGB7	ENSG00000254122
PCDHGA11	ENSG00000253873
PCDHGB8P	ENSG00000248449
PCDHGA12	ENSG00000253159
PCDHGC3	ENSG00000240184
AC008781.1	ENSG00000242020
PCDHGC4	ENSG00000242419
PCDHGC5	ENSG00000240764
CTD	ENSG00000246422
HDAC3	ENSG00000171720
FCHSD1	ENSG00000197948
ARAP3	ENSG00000120318

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NEUROD2	MA0668.1	chr5:140914312-140914322	GCCATATGGT	+	6.02
POU4F2	MA0683.1	chr5:140915033-140915049	ACAATTAATTATTCAA	-	6.07

Enhancer Sequence

CTAGCAGGGA AAAGATTAGA AAAGCATGAT TAAAAGTAAG CCACCTCTGT GCTTTACCAA 60
GCAACTACTG TCCAGCGTGA AATGGCCCCT CACTTCCTCT CTATTATAAT GGTCTATTGT 120
ATTCCTTCAA AACTAACCTC CTCTTCAACC AACCACCCTT TTATTACTGA ACCTCCCCCA 180
ACTCTAATAA ATATCTCATT TTCATTTCTT CAATATTTAT CAGTAATGCT TTCCTACCTA 240
CATCCTATCT ACTTGCAGGG ATCAGCAAGC TGCCTGTAAA GGACCAGATA GTAACTATTT 300
TAGGCTTTGC AGGCCATATG GTCTCAATTA TTCAACTCTG CCACTGTAGC ATGAAAGCAG 360
GCACAGACAA TACATAAATG AATGGGCATG GTTGTGTTCC ATTAAAACTT GATTCACAAG 420
AACAGTTGGT TAGTAGTAGT TCAGCAGTCC CCTTCCACCA TGTTATCCTT CCTTTTGTGC 480
CTATTTAAAA ATCCAACTTA TCTTTCAAGC TCCATCTTTT TTGTTTGTTT TTTGAGACAG 540
CATCTCACTG TGTCACCCAG GTTGGACTGC AGTGGCGCAA TCATGGCTCA CTTGCAGCCT 600
TGACCTCTTG GGCTCAGATA ATTCTCCCAC TTCAGGGTCC CAAGGAGCTG GGACTACAGG 660
TGCAGGCCAC CACGCCCGGC TAATTTTTTT ATTTTTTGTG GAGATGAGGT TTCACCATAT 720
TGCCCAGGCT GGCCTCAAAC TCCTGGGATC AAGCAATCTG CCTGCCTCAG CCTCCCAAAC 780
TGCTAGGAGT ACAGGCATGA GCCACTGTTG CCCTACCTTA AGCTCCATCT TGAACATGAC 840
TTTCTCTAAA AAAATTTTGT TTTCTCAACT GCCTATGATT GAGGTAAAAT ATACTTCTGC 900
CTTCTGCATT CTTTTCAGAC TATCCAAAGC CATCATATTC TTCCCTTCTC ATGAAACGTT 960
CCCTGATAAA TGATACTCAC TCTCTGCTTT GATAAACTTA TTTTCATGGT ATTTGTTATC 1020
TATATCTCAT CCAACAATTA ATTATTCAAT GTTTTGTGAC ATTGCATACG TATTATCTTG 1080
ATCTTTTTAA AGCCTCTGTT ATTTAATAAG TGTGGATATT TCTCATCCCA CCTAGATTTT 1140
GAACTTCAAG GGCATGGGCA AAACAGTATT TCATTGTATC ACTCCCTTAA 1190