EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-26114

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr3:49201690-49203690

Target genes

Number: 26
Name	Ensembl ID

PRKAR2A	ENSG00000114302
SLC25A20	ENSG00000178537
ARIH2	ENSG00000177479
C3orf71	ENSG00000221883
RP13	ENSG00000235236
P4HTM	ENSG00000178467
WDR6	ENSG00000178252
MIR425	ENSG00000199032
NDUFAF3	ENSG00000178057
DALRD3	ENSG00000178149
IMPDH2	ENSG00000178035
AC135506.1	ENSG00000241461
QRICH1	ENSG00000198218
QARS	ENSG00000172053
USP19	ENSG00000172046
LAMB2	ENSG00000172037
CCDC71	ENSG00000177352
KLHDC8B	ENSG00000185909
CCDC36	ENSG00000173421
RP11	ENSG00000236980
C3orf62	ENSG00000188315
USP4	ENSG00000114316
GPX1	ENSG00000233276
RHOA	ENSG00000235908
NICN1	ENSG00000145029
DAG1	ENSG00000173402

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs4499638

chr3

49202782

hg19

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PBX1	MA0070.1	chr3:49202809-49202821	ACATCAATCATA	+	6.11
RREB1	MA0073.1	chr3:49203561-49203581	GGGTGGGGGTGGGGTGGGGG	-	6.74
RREB1	MA0073.1	chr3:49203560-49203580	GGGGTGGGGGTGGGGTGGGG	-	8.54

Enhancer Sequence

CACCTCCAAG ACAAGAGGAA AAGAGTCAAT AAGAATGGCA CTAAGACAAG GGGCCAGAAC 60
ACATAGACAA GTCAATCAGT GCCCCAATCT CCATGACACT GAGGAATCTG GCCAGAGTGA 120
GACACTTCCT GGTGTAAAAC CCTGGTCTCC TGACCCTCTA CCATGCTGGG GTGGGAGGAG 180
AGGCTAAGGA TCAGGGAGTT TCTTCAAGAT ACATGCTCAG AAATACCTCA GAGCCATCCA 240
ACCTGCTGCC GGGTCCCTGA AAAGATTTGA GCCTGGTACA TTTTAATTCA ACTCTGTATT 300
TTCTGAAGCC AGAAACCTAG AATTACTCAG CTCTGGGAAT ACAGGCAATA TCCCTGTCCT 360
CAAGGAACCT AGGTTAGAAG GCCAGAAAAA GACACTGTTA AGATTCTTGG GAGTGAATGC 420
TGGCATTCAG CTCAGTTTGC CAATGGGTCA GGAAAGGATT CCTGGGAGAG ACAACACCTA 480
GCTAGGATAT GAGTGATGAA TGAAAAATGA TTAGATGGAA ATGGAACAAA AAGGGGAATA 540
GCTAATGCAA TGGCTCCAAA GTGAGAAAGG GTTAAGGCAT ACTTGGTGTG GGATCTGGGA 600
TCTAGGTGAA AAAACAGGCG AGGATAGAGC AACAAAGAAC CCTGAATGTT AGCCAAAGGG 660
CCCAGACTTA CACCCACTGT CCATGCCCAT CTGTTTCTCC AGCTGCTGCT GTTCATGTGT 720
GGAGCTGGAG TGGGGTGGGG GAATCTCCCT GCCCACCAGA AGTTCTGTTT TCAGTCTCTA 780
GACAGGGTAC TCAGCAACCC ATTTTCTAGC TCCAGAGGCA TGGAGACCTA ATCAAGAGTC 840
GGACTTTTCT TCAACAGAAA CTAAAAAGCT GATGAGTAGC AGGTGCCAAT GACATCTCTC 900
TAGGCAACCA GGCAGACCAG GGACCAGGAA GCCAGACCAA GATCCCAAAG TTTAAGGACA 960
ATGGGAGCCA AAGGCTGCAA GTAGGATGGT GAGTCAAGGG GACATTAGCG GTATGCACTG 1020
TCCTACCTAA GACTTGGAGG GCCACAGACC TCAGTACAGC CCAGATGGAG GTGACTGAGA 1080
ACACCTAACT ACTCCCAGAC TTCTTTAAAG AAGCTGTGGA CATCAATCAT AACTAACATC 1140
TAATACCCAA CCCAACACTG AGGGTTCCCA GAAGCAAGAG GCAGCTCCCC AGCTGCACCA 1200
GAGCATTAAA AGATCAGCCA GGATCAGGCA GGTCCCTCGG GCCATGAGGC CCGTCTGTGT 1260
AGTTTCTTCC CACCGCTCTA ATGCAGCAGA TGAAGTCTTC AGAATACCCT GGAGGAAATG 1320
CCCTAGGGCT CTTTGTTTGG AAACATTCTT GGATCCTCAG GTGTCTTGGG CACTTCCCCT 1380
CCCCAGAGAC CGTTCTCCAA GCACAATCCT TGCACATGAC TTTAGTTCTT TATTAATGTT 1440
TTTTGAAGGG ATGTAGTTCC CAGAGCTGTG AACTGTAGAA GAGAGAGGGA CCTATTTCCC 1500
ACCCTCACAC GCGCCCCAGC GCAAATATTT GGGGTGACCT GGGGGCTCTT CCACCCAGGT 1560
TAGGCTGGGC TCTTGGGAGG GGTTTTCTGG GCTTTCGAGA AGCTTCGGAA ACAGAGGCTC 1620
CTGCCCGGCC TCCGACTTCC CTTCACACGT GCCCCCGGGG AAGGCAGGAG AAGTTGACGG 1680
AAGATAGGGC GTGAGAGAGG CGCCACACAG GCAGACCGGG GGAGGGGGCA GATCGGGGCC 1740
CTCAGGCTGG GAATGCACGT CCTTAGGGCC CAAGCCGTGA GGCGGGGGTC ACTGAGGCAG 1800
CGAAATGTAC AGGGTGAACG GTGCTAGCCC TACCGGGACC GCACAGCCCC AGGGTGGGGT 1860
CGCTGGGCGC GGGGTGGGGG TGGGGTGGGG GGTCTCGGCC AGGCCGGCGG AGGACGCGGG 1920
TCCGGGAAGA GTTGGCCGCT TGCCCGTCCG CCCTGCCGCC TCGCGGGCCG CCCCTCCGCG 1980
GCGCGGCTAG GCCCGCGGCT 2000