Tag | Content |
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EnhancerAtlas ID | HS176-24728 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr21:40159250-40160860 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nkx3-2 | MA0122.3 | chr21:40160831-40160844 | TTTAAGTGTTTTT | - | 6.64 | ONECUT1 | MA0679.1 | chr21:40159534-40159548 | CATATTGATTTTTT | - | 6.29 | ONECUT2 | MA0756.1 | chr21:40159534-40159548 | CATATTGATTTTTT | - | 6.25 | ONECUT3 | MA0757.1 | chr21:40159534-40159548 | CATATTGATTTTTT | - | 6.58 | PLAG1 | MA0163.1 | chr21:40159506-40159520 | CCCCTCTGGGCCCC | - | 6.36 | PLAG1 | MA0163.1 | chr21:40160484-40160498 | GAGGCCCTCGGGGG | + | 6.62 | RREB1 | MA0073.1 | chr21:40159442-40159462 | CCCCCACCCACCCCCACCCG | + | 8.75 |
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| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_23299 | chr21:40159082-40160667 | Colon_Crypt_1 | SE_23922 | chr21:40159153-40160245 | Colon_Crypt_2 | SE_23922 | chr21:40160251-40160569 | Colon_Crypt_2 | SE_24852 | chr21:40159099-40159661 | Colon_Crypt_3 | SE_24852 | chr21:40159665-40160215 | Colon_Crypt_3 | SE_25850 | chr21:40157795-40162661 | Duodenum_Smooth_Muscle | SE_26886 | chr21:40159374-40160355 | Esophagus | SE_27636 | chr21:40156196-40163184 | Fetal_Intestine | SE_28570 | chr21:40157745-40163071 | Fetal_Intestine_Large | SE_34978 | chr21:40159039-40160957 | HeLa | SE_36155 | chr21:40158929-40160950 | HMEC | SE_47242 | chr21:40156323-40162674 | Panc1 | SE_50186 | chr21:40159118-40160754 | Sigmoid_Colon | SE_52374 | chr21:40159046-40160821 | Small_Intestine | SE_56279 | chr21:40158914-40160830 | u87 | SE_56782 | chr21:40159078-40160845 | VACO_400 | SE_57400 | chr21:40159137-40159496 | VACO_503 | SE_57400 | chr21:40159656-40160695 | VACO_503 | SE_64260 | chr21:40158863-40160711 | NHEK |
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| Number: 1 | ID | Chromosome | Start | End |
GH21I038784 | chr21 | 40156288 | 40163267 |
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Enhancer Sequence | TCAGTTCCTT TCCTCCATTC CAGAAGACCC TCAAGCCTGT CCCATGCACC TGGTTTTACA 60 TTTTTAAATG TTAAAAGGAA GACCACCGTG AAAGATTGGC ATGTTAATAG TAGGCTAAGG 120 CGACAGGTGC TGGGGCTCCG GCTTAGAGAT CCCCACAGAT TCCATGCTCC CAGGGCTGGC 180 TGCAGCCATC TGCCCCCACC CACCCCCACC CGGCCCAGCC CTCCCCTCCT GGAGGTGGAA 240 TCGTGGCTTG CACAATCCCC TCTGGGCCCC TGGGGGAGGC GCACCATATT GATTTTTTGG 300 ACTTCGTTTC TGTGTGTCTC ACCAGTCTTT GCCCGGCACA GTGACTCACT GGCGTCCCTT 360 TCAGGACTTT CTCCCGCCTG ATAACATCTA AATGACTCAT GCCTACACCA CCTGGAGAGC 420 TCAGGGAAGG CACGGTTTGT TCAGGCCACC CTCACTCCAA GGGCCAGCCC TTTTTTGGAA 480 TAGAAACTAA AAGTTGGTAG CTTCCATTTG TAGTTCCATC TAACAGAAGA GCCGACCCAC 540 TCACATTAGC TGGCTCACGA CTAAGGCAAC CAATGCCTCC CAGAACATAG ACTCAACTGG 600 CAACCCCGGC ACTGAAGGTC AAGGTGAGTC AAAGACACTC ATGCAGAAGG GTGGATGCTC 660 TTCCAAGTGT GACTGGCTGG CCTGCACGGC TCACTGCCTC CCCTCCTCCC GTCAAGATGC 720 AGCTTCAGTT TAAACCACCT TCGTTCCATT CATCAAAGAG GAATATTTAC TGTTATTGTA 780 ATGACTCTTC TCACAGTACA CAAGGCTACA CCTGAAACAC ACAGGCCTTT CAGAAAGCAC 840 AAAGGAGCAT TGTGCAAGCC CCTGCCCAGT GAGATGGATG GGGGCGTAGA CACGCCAGTT 900 AACAGCCGGG CTTTGCAGGC CAGCAAGACT TATCTGTGGC CGCACCATGG CCACTGAGCT 960 TGTACCTTTC TTCTTTTAAA AATTGCTCCT TCATTATAAG CAGAGTTAAA TACCTGCACA 1020 TGTGATTTGT GTTGAAATAA TAAAGCAACA AACACACATC AAGCTGAGGA GAGAATCTTG 1080 GCTAAGGTAG GAAGTCGTGG GTCTGGTCTC AGTCTGTGCT GCTGACCAAC TGTAAGAACT 1140 CAGAACTCAC TGTCCACTCA GGACCACAGT GTCTCATCTG AAAGGACGAG GAGACTGGAA 1200 CACACCAGAG CCATGGTTCT CAATGTGTGG TCCAGAGGCC CTCGGGGGTC CCTGAGCCTC 1260 TTTCTGGGGA TCTGTGAGGT CAAAACTACT TTCACAAGTA TGGTTTGCCT TTTTCACTCT 1320 CACTCTCTCA TGCTTGAACA ATGGAATCTT CTAAAGGCTT CCTGACACGT GATGCTACAA 1380 TGGATGGAAT CCAGAGGTGG ATAGGAGAAG CCAGCTGCCT TCTATTAAAC CAGAAATGAA 1440 GAACATTTGC AGAAATGTAC AACAATGCCA TGCTTCCCAT TAATTATTTT GTTCTTGCTT 1500 TAGAATATGT CACTTTTCAT TGAAAAATGT TACTCATGAT TTTATGTAAA AGGTTTATTG 1560 TTGTTACTTT TAAATACATA TTTTAAGTGT TTTTTAGTTT TGATTTCTAA 1610
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