Tag | Content |
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EnhancerAtlas ID | HS176-24225 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr20:49056880-49058560 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | + | 6.02 | BHLHE41 | MA0636.1 | chr20:49058365-49058375 | GTCACGTGAC | - | 6.02 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | + | 7.12 | MITF | MA0620.2 | chr20:49058361-49058379 | CTGGGTCACGTGACCACC | - | 7.12 | STAT3 | MA0144.2 | chr20:49058321-49058332 | TTTCCCAGAAG | - | 6.62 | USF1 | MA0093.2 | chr20:49058365-49058376 | GTCACGTGACC | + | 6.14 | USF1 | MA0093.2 | chr20:49058364-49058375 | GGTCACGTGAC | - | 6.14 | USF2 | MA0526.2 | chr20:49058361-49058377 | CTGGGTCACGTGACCA | + | 7.69 | USF2 | MA0526.2 | chr20:49058363-49058379 | GGGTCACGTGACCACC | - | 7.88 |
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| Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
SE_00918 | chr20:49055454-49057748 | Adrenal_Gland | SE_00918 | chr20:49057773-49058639 | Adrenal_Gland | SE_03055 | chr20:49057830-49058401 | Bladder | SE_31629 | chr20:49056618-49057629 | Gastric | SE_31629 | chr20:49057673-49058675 | Gastric | SE_34001 | chr20:49055295-49058558 | HCC1954 | SE_35076 | chr20:49055128-49058839 | HeLa | SE_36034 | chr20:49054845-49058832 | HMEC | SE_42215 | chr20:49056844-49058813 | Lung | SE_48118 | chr20:49056153-49058331 | Psoas_Muscle | SE_51230 | chr20:49057316-49058890 | Skeletal_Muscle | SE_52679 | chr20:49055432-49058808 | Small_Intestine | SE_64485 | chr20:49055004-49058700 | NHEK |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr20 | 49058248 | 49058472 | chr20 | 49057048 | 49057261 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I050438 | chr20 | 49054830 | 49059838 |
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Enhancer Sequence | AACCCTGTCT CTACTAAAAA CACAGAAATT TGCTGGGCGT GGTGGCATGC ACCTGTAATC 60 CCAGCTACTG GGGAGGCTGA GGCACAAGAA TGGAGAATTG CCTCCCTCTG AACTTTTTAT 120 TTGGTGCTAT AAATAAACCC TTTCAGGTCT GAGCGGCAGT CAGGTGGATT TCCAGTTACT 180 TGCAGCTGAA TGCATTTCTA CCTGTCACTC CTCCTCAGGA CCATAGGTTG CTCTGGATTC 240 CCACCACACA CGTGGAGATA CTGAGGTCTG GAATGCAGAG AAAACTTCCC CAGTGTCACG 300 TGGTGGAGTC ATGAGTTTAC TGACTCACTA CCCAGTGCTC TTTCCGCTCA AGACAACCTC 360 GTGGTCCGTT CCTTTCATTC GGGCTGCTGT ATGCATGGCC AACAGCTGCT TTGTAAATTA 420 AACACTTCCC ATGGAGGCAG TGATGATGAT GACCTTGCCC CTGAATCTTT CCAGCCTCTT 480 ACGTAAATCG CCCCTGGGTC ACTGTCTCCA TGCCTTTGGA CCCAGGACAG CTTCCCCACA 540 TCCTTTAAAA CGATGAGATA ACCACATGTA AACCCAGTGC TCCTGGAAAG GTGTGAGTCA 600 TGCATCACGG AACAGAAGGT TCACAGCCAG GAGTCCGCCT ATCATGCTTG TCATCCAGCC 660 TTCCAGGCTT GCGTGGAGCT TGTTCACTGC AAAGCTGATT CATCTGCAGC TTGTGGTCAG 720 CTCTGACACT CAGATCATTT TCTGCTCATC TTGTGCCTGG CTAGTGACCT TTAATTAGGT 780 GCTGTCAACT TCCTGTCTTC CTGTCTCTGT CCATGTTGTC TTTCCCCCTA TTTTAAAAGG 840 ACTGTATGAA TACTAAAGAC ATGATGATGA TGATAGCAGT TAGCACTTAC TATATTCTAA 900 ATGCTCTATA TAAATTTAAA AGTTGTTTCT CAAAAGCCAT TGTCTGAGAT AACTAGTATT 960 ACTATTGCAG TTTTATGGAT TGGAAAACAA GGGCTTAGAA AAGTGAAGTC ACTTTCCTTG 1020 GGTAACAGAG CCAGGAGTAT TTGGTGGAGC TGGAATATGA ACATGAGTGT GTTGGACCCT 1080 GGAGTGCAGC TCGAAAACAC AAAGCCAGTT GAGTCTGTTA AGCTAGCTTC AGAGGCTCCA 1140 CTACAGCAGT TTAGACTCTA ATTACATTTA CTGTTTGTTT AAAAGACTTC TGGACAGACT 1200 GGAGACCTCA TGGTGTATTT GTCATCTTAA GGTTGTCATA AAGGACCCAC AGTCTTTGCA 1260 CTTTCCCTCT CCTCCGTCAA CAGCAAGTCA GCAACTTGTC CTCAGTCTGG TCTTCACATC 1320 ACAGATGGCT GCCACAGCTC ACGCATCACC TCTTCACACA ACAATGTCCA AAGCAGGCAG 1380 AGAAGGAAAG GGGCAAATAG GTTTCTCTTT ATGTGCCTCT TTCTTGTCAT AGAGTAAACT 1440 CTTTCCCAGA AGCCCCCAGA TTAGTTTCCC TTTGGACAAA ACTGGGTCAC GTGACCACCT 1500 CTGAGCCAAT CGCAGGTCCA GGAGAACAGG GTGGCTATGA CTGGGTAAAG CAAATGCAGT 1560 TTTTCCCCTA GGACTAGGCA CATGGCCAGC TGCAGAAAGT CAGGGTTTTC TCAGCAGGAA 1620 AGGAGAGGGG AATGGCAGTT GACAAGGCAA CCCGCAGTGT CTGATACCCC AGCATTTAAA 1680
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