Tag | Content |
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EnhancerAtlas ID | HS176-24223 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr20:49039460-49041160 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Hnf4a | MA0114.3 | chr20:49039767-49039783 | GAAGAACTTTGACCCC | - | 6.15 | LMX1B | MA0703.2 | chr20:49040733-49040744 | TTAATTAAATT | - | 6.32 | LMX1B | MA0703.2 | chr20:49040730-49040741 | ATTTTAATTAA | + | 6.62 | Nr5a2 | MA0505.1 | chr20:49039472-49039487 | GAGTTCAAGGCCAGA | + | 7.28 | PLAG1 | MA0163.1 | chr20:49040011-49040025 | CCCCCGTGACCCCC | - | 6.08 | RREB1 | MA0073.1 | chr20:49039969-49039989 | ACCCCAGCCACCCCCTCCCA | + | 6.9 | ZNF263 | MA0528.1 | chr20:49040284-49040305 | GAGTGAGGAGAGGGAGGGAAG | + | 6.05 | ZNF263 | MA0528.1 | chr20:49040287-49040308 | TGAGGAGAGGGAGGGAAGGGG | + | 6.18 | ZNF263 | MA0528.1 | chr20:49040280-49040301 | GAGGGAGTGAGGAGAGGGAGG | + | 6.3 | ZNF263 | MA0528.1 | chr20:49040250-49040271 | GAAGCAGGAAGAGGTGGAGGA | + | 7.74 |
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| Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
SE_00918 | chr20:49038469-49039686 | Adrenal_Gland | SE_00918 | chr20:49039750-49040682 | Adrenal_Gland | SE_03055 | chr20:49039032-49039646 | Bladder | SE_31629 | chr20:49037959-49041028 | Gastric | SE_34001 | chr20:49037915-49041306 | HCC1954 | SE_35076 | chr20:49038201-49041372 | HeLa | SE_36034 | chr20:49037885-49041272 | HMEC | SE_42215 | chr20:49038001-49039681 | Lung | SE_42215 | chr20:49039704-49040844 | Lung | SE_48118 | chr20:49039080-49041243 | Psoas_Muscle | SE_48691 | chr20:49039779-49040484 | Right_Atrium | SE_50944 | chr20:49037958-49041085 | Sigmoid_Colon | SE_51230 | chr20:49039655-49040755 | Skeletal_Muscle | SE_52679 | chr20:49038035-49041184 | Small_Intestine | SE_53316 | chr20:49039680-49040728 | Spleen | SE_54839 | chr20:49038643-49040764 | Stomach_Smooth_Muscle | SE_64485 | chr20:49038442-49040784 | NHEK |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I050421 | chr20 | 49037982 | 49041285 |
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Enhancer Sequence | ACTTGAGATC AGGAGTTCAA GGCCAGACTG GCTAACATGG TGAAACCTCG TGTCCACTAA 60 AAATACAAAA ATTAGCTAAG TGTGGTGGCA CATGCCTATA ATCCCAGACA CTTGGGAGGC 120 TGAGGCAGGA GAATTGTTTG AACCCAGGAT GGGGAGGCTG CAGTGAGCCG AGATCACGCC 180 ACTGCACTCC AGCCTGGGCG ACACAGACAG ACTCCATCTC TAAATAAATA AATAAATAAA 240 TAAATAAATA AATAAATGAA AGTCTGGAAG GAGGGTGGGG CTCTCGTGTT CTGGGAGGAT 300 GATTTATGAA GAACTTTGAC CCCAAATCCC TGGGAGGGGC CTGTGGCCAA TCCCAGACAA 360 GCAGGGCCTG GCTCTCCTTG GACAGTGTTT ACAAGCTCGC TGATGACTCG GCCTTCTGCC 420 TTCCTGCGGT TTGCTAATCA CTGGGTGCTA TGTGCCGGGA TGTTCTCCTG CTCCTCAGCC 480 CTGAGAGCAC ACTCTGACTC ATGCCTCCTA CCCCAGCCAC CCCCTCCCAT CACCACCAAG 540 GCTGCCATCT CCCCCCGTGA CCCCCAAGGC CCCACAGAAT CACACGACCC TGGCACCAGG 600 AAGTGCACCT GTGTCTCCAA TCAGAACTGC CCATTTCACA GAGGAAGAAA CTAAGGTCCC 660 ATGAGAAAAG CCTTTCCCCA AGTCTCACCC CAAGACAGGA ATAGCACCAG GGCCCGGTCC 720 CAGGTCTCCT AACACCTGGT CCTAATTTTT CCCACTGTTT AATGACAGAA GAGAGAAAAT 780 GAGAAGAAAG GAAGCAGGAA GAGGTGGAGG AGAAAGCAAG GAGGGAGTGA GGAGAGGGAG 840 GGAAGGGGAG CTGGAAAAGC AGTGTTCAAA TCCCCAACTC CTAAGTGAGC CCTGGGAGGG 900 GAGGGGAGAG GATTCGTGTT TGTTGGGCAC CCACTACACG CCAGGTGCCT CGACTGTGTC 960 AGCTCCTTCA GCAGAATCCT CACAGGAGAA TGGATACAAT TACTTACTCT AAATGCTTTG 1020 GAAAACAGAG AAGCTGTGCA ACCCATCTAC CATCACACAG CAGTTACCTG GCAGAGAGGA 1080 GAATGGAACC CAGGTCTGGC TGCAATTCCT AACCCTAAGC ACACTCCAGG CCCCAGGCTG 1140 CCTCCAGCCC AGCCTCTGCT CCGCTCCTCT TTTTGAGGCA GTTGCAGCCT CCACTTCCAG 1200 AGCCGATCAG CAGAGGCTTT CCCCCGGCTG CCCACAAGCC AGCAGACGGA TTTCCTTTGG 1260 CCCACAGGGC ATTTTAATTA AATTTGAGCT AATGTTCATA AATCAAGAGA TTTCACATAA 1320 AAATTCAGAT TTCTACCTCC CTTAAAACAC TGTAAGATTT CACTGGGCTA AATCCACATT 1380 CCCACCTGGC AACCGTCAGC TGGGGACAGG GGTATTTGAA GTGGACACAC CAGTTCCCCC 1440 ACACTCCCCA ACTCTCCCTG CTGCCTCCCT GGTCCTGAGG CTGAATGTCG GGTGCCATTC 1500 ATCAAAATGC ATACACTGTT GTTTTCTGAG AGCAGGGACG TATTTCTCTG TAACTGTATC 1560 TCTTTCAAAA AGAAGAAAAC AAGTGCTAAT CCAAAAGGGG TCAAGTTTCA TGAAAAATGG 1620 GGGAATGTCT AATTCTTTGC GGAACCAAGA GATACTCCTT CATGCTTATT ATGCAGACGA 1680 AGTGTGCCTG AGCCCTCACA 1700
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