EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-24134

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr20:44538950-44539500

Target genes

Number: 21
Name	Ensembl ID

HNRNPA1P3	ENSG00000226188
WFDC3	ENSG00000124116
DNTTIP1	ENSG00000101457
UBE2C	ENSG00000175063
TNNC2	ENSG00000101470
SNX21	ENSG00000124104
ACOT8	ENSG00000101473
ZSWIM3	ENSG00000132801
ZSWIM1	ENSG00000168612
SPATA25	ENSG00000149634
CTSA	ENSG00000064601
NEURL2	ENSG00000124257
PLTP	ENSG00000100979
PCIF1	ENSG00000100982
ZNF335	ENSG00000198026
MMP9	ENSG00000100985
SLC12A5	ENSG00000124140
RP11	ENSG00000240742
NCOA5	ENSG00000124160
RPL13P2	ENSG00000213820
CD40	ENSG00000101017

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr20:44538958-44538970

GTTTGTTTGTTT

6.32

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_06643

chr20:44538524-44541460

Brain_Hippocampus_Middle

Enhancer Sequence

AAAGTCTTGT TTGTTTGTTT GCCAGGTGCG GTGGTGGCTC ATGCCTGTAA TCCCAGCACT 60
TTAGGAGGCC GAGGAGGGCG GATCACTTGA GGTCAGGAGT TCGAGACCAG TCTGGCCAAC 120
ATAGTGAAAC CCGTCTCTAC CAAAAATACA AAACTTAGCA GACCGTGGTG GCACGCGCCT 180
GTAGTCCTAG CTACTCGGGA GGCTGAGGCA GGAAAATCGC TTGAACTCGG GATGCGGAGG 240
TTGCAGTGAG CCAAGATCGC GCCACTGCAC TCTAGCCTGG GCAACAGAAC AAGACTCCCT 300
CTCAGAAAAA AAAAAAAAAA AAGTCTTGTT TGCTTGCACC CCCTCCCCTC CCACACCCTG 360
GGGTTGCTAC ACCCGGTCTT TTAATAGAGT CCGTTCACTT TGCCTCCATC ACCTAAGCTC 420
CGTCTCACAT CTCAATTCCT TATTCCCCCT CCCTCATCCT AAACCATACT TAGAGCCTTC 480
AGTTTCTCCA CCCCTCCGAT TAACTCCACC CCGTGCCCGA GACTCCACTC TCATCTATTG 540
GGAAGTTCCT 550