Tag | Content |
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EnhancerAtlas ID | HS176-23879 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr20:30262630-30263550 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF2 | MA0051.1 | chr20:30262881-30262899 | GGAAAGTGAAACCCTTCC | + | 7.54 |
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| Number of super-enhancer constituents: 49 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30261809-30264949 | Aorta | SE_03156 | chr20:30261419-30265068 | Brain_Angular_Gyrus | SE_03894 | chr20:30259899-30271467 | Brain_Anterior_Caudate | SE_04818 | chr20:30251012-30278616 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30250994-30271647 | Brain_Hippocampus_Middle | SE_06739 | chr20:30256527-30267510 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30256426-30271516 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30262676-30264213 | Brain_Mid_Frontal_Lobe | SE_12541 | chr20:30262820-30263673 | CD34_adult | SE_12738 | chr20:30262699-30263257 | CD34_fetal | SE_12738 | chr20:30263321-30263650 | CD34_fetal | SE_13448 | chr20:30259763-30266214 | CD34_Primary_RO01536 | SE_14426 | chr20:30257012-30271334 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30261088-30269159 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30261219-30264993 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30260085-30265113 | CD56 | SE_20764 | chr20:30261115-30270147 | CD8_Memory_7pool | SE_22440 | chr20:30260105-30271391 | CD8_primiary | SE_25330 | chr20:30259962-30278833 | DND41 | SE_28698 | chr20:30262664-30263525 | Fetal_Intestine_Large | SE_30903 | chr20:30261089-30265103 | Fetal_Thymus | SE_31430 | chr20:30261865-30265038 | Gastric | SE_34309 | chr20:30262490-30264853 | HCT-116 | SE_36989 | chr20:30262337-30265046 | HSMMtube | SE_39443 | chr20:30261311-30264932 | Jurkat | SE_39853 | chr20:30260148-30264978 | K562 | SE_40644 | chr20:30261776-30265010 | Left_Ventricle | SE_41648 | chr20:30262737-30263764 | LNCaP | SE_42121 | chr20:30261312-30265122 | Lung | SE_43515 | chr20:30261582-30265038 | MM1S | SE_45708 | chr20:30261712-30267501 | Osteoblasts | SE_47264 | chr20:30261487-30270363 | Panc1 | SE_48182 | chr20:30261855-30264471 | Psoas_Muscle | SE_49346 | chr20:30261840-30264952 | Right_Atrium | SE_49886 | chr20:30261073-30265055 | RPMI-8402 | SE_50155 | chr20:30261479-30264986 | Sigmoid_Colon | SE_51884 | chr20:30262674-30264258 | Skeletal_Muscle_Myoblast | SE_52373 | chr20:30261708-30265016 | Small_Intestine | SE_53471 | chr20:30261285-30265111 | Spleen | SE_55108 | chr20:30261709-30264877 | Thymus | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_63683 | chr20:30262660-30265047 | HSMM | SE_65412 | chr20:30262295-30264865 | Pancreatic_islets | SE_66334 | chr20:30261311-30264932 | Jurkat | SE_67146 | chr20:30261582-30265038 | MM1S |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I031672 | chr20 | 30259913 | 30270236 |
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Enhancer Sequence | CAGCACCACT GCACTCCAGC CAGGGCGACA GAATGAGACC CCGTCTCAAA AAAAAAAAAA 60 AAAAAAGGGA AGCCATTTTT AAGCCCCAGT ATGTTTGGCA GCAAACCCCA TATTCTGAGC 120 CAGGGCCATG GCCCTGGGTC TGTCAAGGAG GGTAAAGTAG CCTGAGGCCA TCAGCTGAAT 180 GAATAAGCAC TGGCTCCTGC CAGCTGAGGG GAACTGGTGC CACAGGAAAA GGATGTGACG 240 AAGACCAGGA GGGAAAGTGA AACCCTTCCG TCCTGGCTTC AGTGAGGAAC AAGCATGCCT 300 GTGCCAGACG AACCCTTCCT TCCTCTTGGG TGACTCTGGA GGGCCCAGGC CCATTGCTTC 360 CTTCCTGCTT GGTTATTTCA GGAAAGAGGT AGGTGGAGAA GAGGAAGAGG CTACTAGCAG 420 CCAGGAAAAG TGCCAGGGAC ACCAGAACTG TACCTTGTTC TGTCCTTCTC ACATCCCTGC 480 ATTGGCAGGC TGTGAGTCAC CTGCAGAGTC ACCTTATGCT CCTGGCCTCA GTTTCCCTGA 540 GGGAGAGGCT GATAAATGTG TGCTGAATAG ACAAACATGG CCTTGCTAGA AGATCGCTGG 600 GAGATGGTAG GAAGGGGGTA GGGCAAACGG AGAGGCCTTA TCACTCTTTT GGCAGGGAGT 660 TGCAGGCGGA GACTCGGAAG AAGTGAGGTT TGTGGTTGGA ATCCACTTCC TCTGGTTTTC 720 CCAGGGGAGC TGTTGGCTCC CGAGATGTGA GAAGAACATG GCCTTTCTCC TCTCCCCCAC 780 GGAAACATAG GCCTGGAGGT GGGCAACTTG GAGAAGCAGC TCAGTGGAGG CAGGGCAAAG 840 AGAGGGGTGG CAAGACTGTG TTGGGGTCAA CACCTCAGTC CAGCCGGCCC AGGTATGGGT 900 GGGTGCCACA GCAAGCCTTT 920
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