| Tag | Content |
|---|
EnhancerAtlas ID | HS176-23564 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr20:5639490-5640720 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| MEF2A | MA0052.3 | chr20:5640141-5640153 | GCTATTTTTAGA | - | 6.52 | | MEF2B | MA0660.1 | chr20:5640141-5640153 | GCTATTTTTAGA | - | 6.22 | | RFX1 | MA0509.2 | chr20:5639716-5639732 | GGTTCCCATGGCAACA | - | 6.37 | | RFX1 | MA0509.2 | chr20:5639716-5639732 | GGTTCCCATGGCAACA | + | 6.4 | | RFX2 | MA0600.2 | chr20:5639716-5639732 | GGTTCCCATGGCAACA | - | 6.78 | | RFX2 | MA0600.2 | chr20:5639716-5639732 | GGTTCCCATGGCAACA | + | 6.7 | | RFX5 | MA0510.2 | chr20:5639716-5639732 | GGTTCCCATGGCAACA | - | 7.02 | | RFX5 | MA0510.2 | chr20:5639716-5639732 | GGTTCCCATGGCAACA | + | 7.04 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_09377 | chr20:5630262-5642380 | CD14 | | SE_34215 | chr20:5634931-5640505 | HCC1954 | | SE_58609 | chr20:5622683-5700446 | Ly1 | | SE_60511 | chr20:5614796-5674594 | DHL6 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I005641 | chr20 | 5622401 | 5641301 |
|
Enhancer Sequence | CGGGAGGATT GTTTGGACCC GGGAGTTCAA GACCAGCCTA GGCTACATAG AGAAACTCCA 60
TCTGTATTGT TAAAGAAAAA AAAATTAAAA ATTAAAAAAA AAAAACATGT ATTGGAAGAA 120
AATACTCTGG CAGCTTCAAA ACACCTGACA AGAGGGGGAA ACCCTGATAC AGCTTCAGAA 180
CTTCAGCCCA TGGAAGCTGC ATTCAACAAA CTACTGAATC ATGTCTGGTT CCCATGGCAA 240
CAGCCCTGAA GCGGCTTCAC TGAACAAGAC TGAATGTGAT CAACTGCCAA CATGGAAATA 300
TCAACCCTTC CTCTTTGTTT TTCAGCATTT CTCTCACTGA CATTCTGTGT TGCAAAGCAG 360
GCCTTGGAAC GCTGCCCGTA TCTCCCTCCT AGATTCACCA AATTTCAGCG GTGAAGCCCC 420
CCTCCACTGC ATTTTTAGTG TAGAACCTTG CCAGGGTTGG GGGTGGGGGA GGTGGGGGCC 480
ACTGCATACA TTCTAAAGGA CAAGGAAAAT AATTTCAGAT AGTTCCTTAC CCACCCATGT 540
CCCTCACTAA GAGCCCTGGT TTTTCTCTCA GGCAGTAACG CTTCTTTCTG TTGGACTCAA 600
ATCAGCATAT TTATGTTCCA TAGCAAGACA GATTTCCTAA GTAAGAGAGA AGCTATTTTT 660
AGAGGATCTT GAAAGGGGGG AAGATCTCAG AAACGACCTA AACTTAGATC CAGCTTTTGG 720
TACAGTGTGC CTCACAGGGA CATAGACTGC ACGTGCACAA ACATTTCTTG CAGCCTGTTA 780
TAAACTTCCT GAGATGCCCT CAAAGCCTGC GCTGGGGTGG GGCCCAGAGC TTCCCCCTGG 840
AGGTGCCATA GATCCTTGCC CTTCTTTCCC TTTAAGAACA GCACACTGTC AGTTCTCCAG 900
CTCTTGAAGA GCCCTACAAT GAGGTCAGAC CATATCAGTG GTACATCTGG GCTGTCTGTC 960
AGTGCATTTG GGTGAGTTCG CTTCGAGGGA AAGAATGTCA GCCGTAGTGA GTTTGTGGTT 1020
AGAGAGTCAC TTGTAGATAT GAGTGTGGAC CCCACGCTGG AGTGCAGTGG CACCATCTCA 1080
GCTCACTGAT GGAATATTTG ATGATTTCTA TCACCAAATG AAGCCAGGGG ATGGGTGTGT 1140
GGGAGGTTAT GATACTATTC TCACTACCAT GGTGGATAGT GAGCATAAAA ATTACACGTG 1200
GCCAGGTGCG GTGGCTCACA CCTGTAATCC 1230
|
