| Tag | Content |
|---|
EnhancerAtlas ID | HS176-23484 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr20:1789440-1790950 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ESRRB | MA0141.3 | chr20:1789608-1789619 | ATTGACCTTGA | - | 6.02 | | Esrra | MA0592.2 | chr20:1789609-1789620 | TTGACCTTGAA | - | 6.14 | | Nr5a2 | MA0505.1 | chr20:1789608-1789623 | ATTGACCTTGAATTC | - | 6.05 | | Sox3 | MA0514.1 | chr20:1790835-1790845 | AAAACAAAGG | - | 6.02 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_03309 | chr20:1789458-1791766 | Brain_Angular_Gyrus | | SE_04057 | chr20:1787896-1793509 | Brain_Anterior_Caudate | | SE_05054 | chr20:1787917-1793513 | Brain_Cingulate_Gyrus | | SE_06036 | chr20:1788184-1802826 | Brain_Hippocampus_Middle | | SE_06926 | chr20:1787656-1793559 | Brain_Hippocampus_Middle_150 | | SE_07894 | chr20:1786943-1793426 | Brain_Inferior_Temporal_Lobe | | SE_08826 | chr20:1790091-1790337 | Brain_Mid_Frontal_Lobe | | SE_08826 | chr20:1790760-1791211 | Brain_Mid_Frontal_Lobe | | SE_09273 | chr20:1790394-1793420 | CD14 | | SE_36482 | chr20:1789115-1794627 | HMEC | | SE_37018 | chr20:1787850-1812476 | HSMMtube | | SE_51714 | chr20:1789077-1795577 | Skeletal_Muscle_Myoblast | | SE_54036 | chr20:1790592-1792764 | Spleen | | SE_63500 | chr20:1789063-1795591 | HSMM |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I001808 | chr20 | 1788875 | 1795485 |
|
Enhancer Sequence | ATTATTTCCC ACTTGTAGAT GTAGAGATGG GGATGCAGTT AGGCTGAACG AGCTGCCCAA 60
GGTCATAGTA AGTGGTAGAA GCTGGGCTTG AACCGGAACC CAGTCTGTCT GATGCAGTCT 120
TCCTTAATCA ATAGCCATGC TGTTACTATT ACTGTTGACA TTACTATTAT TGACCTTGAA 180
TTCTTTACCC AATATCTCCA CACTTCCACA ACACCTGGTG GGGGCAGGAA GAGCCACCTG 240
ACCCAAAGAC TGCCAAAATA TAGGCTGAGC AGCCTGTGAT ACAGCCTGGG ACAGAAGCTC 300
CACCCAGCAG GGCTGAGCCC AATTAACTAA ACTCATCAGC AGTGATGGTG GCTGCCAGTT 360
TGAATTGGAC CACAAAGAGT TGGGATGATG CCTACAAGCT GAAAGACCCT AAAAGATGAC 420
ATAATTCAAA CAAATGTGAA GGCACAGGGG CAATGAGTAA GCCAAACTTC CAAGACAGAC 480
AAGGGGGAGG AGAAATTTGA CAAACGTCTG CTCCTGAGAT GACTATGAAC TGACTCAGTC 540
CCAGAGCACT GGGTCCTGAA TGATGTTCCA GTGGCTAAGT TGTATTCTGT GATGTGTGGT 600
CAAAATTCCT GCCTTCCAGT CCCTGCATGT AGCTTTACAA CAACCCCCAT GGCTCAAGTT 660
AGGAGAGAGG CTCTGCTCTT TTCAACCAAA ATTAGGCTAG CTCAGCTCTC CCGTTTATCT 720
TTAGGGTAAA TGCTAAGATT TGGAAGTGGT GAATGGAGAG GGAGGTAGGA TCAGGACATC 780
CCTCCATCAA TCCCAGGTGA CGAGGCCCAG AAGACATGGC CTGGCCCAGT TCCTGTTATA 840
TCAGAACCTT AGTCCATGTC TCACCATCTA CAATCATATC CTAAGTGATC TCACTCACCA 900
TCTGGGGTGA CTCCGGGCCA GGCGTCTCCC CTGCACTCCA GCCTCATGCC CAGCTACTAA 960
CTCCACAGCT CCGTCCGTGT TACACAGGCA TGTCAAATCT CACCTGTCCA AAATGGAACT 1020
CCTGATTGTG CCTCCAAAAC CCACCCCTTC TGCAGGATTT TCATATCAGG AAATGCCAAC 1080
TCTATAATTC GAGCTGCTTA GGTCAAATAC CTTGGAGTCA GCCCTGGCTG TCCTGAGTCA 1140
TATTCCAACA TTCTTGCAGT CCACAAATTC TATTGGCTCT TCCTTCTAAA CGTATCCGTG 1200
CCCTCCATGA TCACCCTAGT CTGACCCACT ATCGTCTGTC ACCTGGGGTG ACACAACAGC 1260
CTCCTCTTGC CTCTGGCCTG CCTTCTACAA CTTGTTCTGA ACTCAGCAGC CAGAGATGTC 1320
CTGTTAAAAC CTAGGCTGGA GCTTGTAGTC CTCTTGCTCA AAACCCACCC ATCACTGCCC 1380
TTCTCACTCA GAGGAAAAAC AAAGGCCTCC TAAGTCACAC AGTCTGACCT CCTCAGTTTC 1440
CCCTACAGAC CTGCCTCCCT GACCTCACCT CCCAGAGCTC TCCCCAGCCC TTCCTCTATT 1500
CCAGCCACTC 1510
|
