| Tag | Content |
|---|
EnhancerAtlas ID | HS176-20558 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr2:54759560-54760860 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF2 | MA0051.1 | chr2:54760456-54760474 | GGAAAGTGAAACCCAGGC | + | 6.8 |
|
| | Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
| SE_00006 | chr2:54756483-54765677 | Adipose_Nuclei | | SE_07789 | chr2:54759427-54762594 | Brain_Inferior_Temporal_Lobe | | SE_23128 | chr2:54760046-54760783 | Colon_Crypt_1 | | SE_25070 | chr2:54759741-54760836 | Colon_Crypt_3 | | SE_27627 | chr2:54758268-54763136 | Fetal_Intestine | | SE_28537 | chr2:54756686-54763224 | Fetal_Intestine_Large | | SE_35875 | chr2:54757789-54762616 | HMEC | | SE_42137 | chr2:54760107-54760762 | Lung | | SE_50115 | chr2:54759619-54760684 | Sigmoid_Colon | | SE_52386 | chr2:54760045-54760708 | Small_Intestine | | SE_56813 | chr2:54759629-54759972 | VACO_400 | | SE_56813 | chr2:54760130-54760808 | VACO_400 | | SE_61474 | chr2:54749764-54818736 | Toledo | | SE_64270 | chr2:54757826-54762203 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH02I054530 | chr2 | 54757824 | 54762651 |
|
Enhancer Sequence | TTACATTTTT TATACTACGT CTTTGAAATA TACATCTTTT GTATATGTAA CAGACTGGCA 60
AGATATATAC TTATTCCTAA AGTGGAATGT GGAGTGAAAA CATGGTAGAT GGTACTTCCC 120
CACTTCTGAG GTGTTACTGT TTACAGTTTG GAAGGAAGCT GAGGAGAGCG TTGGTCAATC 180
CTGTTAACTA GCACAGTGAA GTAGTTTTTA TGTTTTCTGT AAATGATTGC TTGCATCCCG 240
TGATTGCAGG CCCACTTTCC TGACCTCTGA CCAGTTGCCT TGGTATCATG GAACATGCAG 300
TGATTCAAAC TAAGCTGGAC TTTTTGGAAA CCAGCATTTT ATTTGAAGTA AAAAGAAAAC 360
AGTTACACAA TTTTTTAAAG ACTACGTCTT CCCCTAATTT GTGTTGATTC TACTGTGAGA 420
CAAGAAAAAT GCATTTCTGC TTGAGGTGCA GTAACAAAAC TAGCACAAAT TTCTTTCCTT 480
CTTAACTATT TCTCGGATAG AAGATTCATT CTTAACATAG ACCTTATCAT TATAGGATTT 540
TTTTTTCTTT TCTTGTTGAG AACTTTTACT TTTTCACTTA AAGGAAGCAT TTGACAGTCG 600
CTTCTTTTTA GCATATCTGA ATTGCCAGCC CAGGGCCATT ATTAAGTCAA ATAAGGGTTA 660
CCTGACAGTT AATCTGATAA TCAAGACGGC TGCTAAGTGA CTAACAGGGA GCGTCTGCAG 720
TGTGTGTCTG CTGGACAAAG GGATGATTCA CATACCAGGC GGGATGGAGC GAGATGGCGC 780
AAGATTTCAT CACAGTGCTC AGGATGGCAT GCAATTTAAA ACGTATGAAT TGCCTATTTC 840
TTCAGTTTTT CATTTCATAT TTCCAGACCA TGGTTGACTG AAGGTAACTG AACCATGGAA 900
AGTGAAACCC AGGCTAAAGG GGACTAGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT 960
GTGTGTGTGT GTCTAAACCA TTTGACTTCT AGTGAACGAA CAGAGCCAAC CTCTTCCTGA 1020
ATATGTAAAG AAATCTATAA AACATGGCCT AGAATGATCT AATTAGGAGG AGGAAACCTA 1080
TTTACATGAG ACTATATATG TATACAAGTG CCTGGAAGTT AGTATAGGCA ATGATTGCTG 1140
TAGTAAGATG GAGTTTCGCT CTTGTCACCC AGGCTGTAGT ACGATGGCGC GATCTTGGCT 1200
CACTGCAACC TCCGCCTCCT GGGTCCAAGT GATTCTCCTG CCTCAGCTTC CCGAGTAGCT 1260
GGGACTACAG GCACCCGCCA CCACACCTGG CTAATTTTTG 1300
|
