| Tag | Content |
|---|
EnhancerAtlas ID | HS176-19279 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:50002970-50004040 |
Target genes | | Number: 38 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ZIC1 | MA0696.1 | chr19:50003290-50003304 | CCCCCCCTGCTGTG | + | 6.09 |
|
| | Number of super-enhancer constituents: 26 | ID | Coordinate | Tissue/cell |
| SE_14855 | chr19:49998586-50006523 | CD4_Memory_Primary_7pool | | SE_15707 | chr19:49998891-50005390 | CD4_Memory_Primary_8pool | | SE_16751 | chr19:49998964-50005509 | CD4_Naive_Primary_8pool | | SE_20689 | chr19:49998708-50006423 | CD56 | | SE_21347 | chr19:49998834-50005646 | CD8_Memory_7pool | | SE_21688 | chr19:49998862-50005732 | CD8_Naive_7pool | | SE_22993 | chr19:49998692-50006351 | CD8_primiary | | SE_68187 | chr19:49976788-50037595 | TC32 | | SE_68188 | chr19:49976788-50037595 | TC32 | | SE_68189 | chr19:49976788-50037595 | TC32 | | SE_68190 | chr19:49976788-50037595 | TC32 | | SE_68191 | chr19:49976788-50037595 | TC32 | | SE_68192 | chr19:49976788-50037595 | TC32 | | SE_68193 | chr19:49976788-50037595 | TC32 | | SE_68194 | chr19:49976788-50037595 | TC32 | | SE_68464 | chr19:49990162-50019336 | TC71 | | SE_68465 | chr19:49990162-50019336 | TC71 | | SE_68466 | chr19:49990162-50019336 | TC71 | | SE_68467 | chr19:49990162-50019336 | TC71 | | SE_68468 | chr19:49990162-50019336 | TC71 | | SE_68469 | chr19:49990162-50019336 | TC71 | | SE_68470 | chr19:49990162-50019336 | TC71 | | SE_68471 | chr19:49990162-50019336 | TC71 | | SE_68472 | chr19:49990162-50019336 | TC71 | | SE_68473 | chr19:49990162-50019336 | TC71 | | SE_68474 | chr19:49990162-50019336 | TC71 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | CTTTACCAGA GCATTGGTGG GGGTGGGGGT GTGCCTCGGG GAATTGGGCA GAGCTGCTGT 60
CAGAGAGGCT GCCTGCCCAT GTCTGTGGGT GAGGACAGTG GAGCCTGAAC TGAGATGCCT 120
GCCTTCCCCT GGGTCTCCTT CTTTGGTCCT TGTCACCTTT TCGGTGTCTG AATAAGGCTG 180
ATTACCTGGC GTTGCGCTGT CCCCCCGCCC CCTCCGGTCT CTGGGGAGGA AGTGAGTGAC 240
GGCGGAGGCC CCTGGGTCCT CCAGGCCCTG GTCTGTCTCT TTCCTGACCA CCTCGGGTGG 300
GGAGGGGAAG AAGCTGCAGC CCCCCCCTGC TGTGGGCATG GGCTCACCCA GGTAGAGTGG 360
GATGTGCTGA GGCCCTGTTG TCTGGCTGTG AAGTGTAAAG GTCTTGGCTT TAGCCTGGGC 420
CTCCTATCCC TCCTTACAGC CAAGGATGGG GGCCCCATGC ACGCACCACA CACGCCTAGT 480
TGGGCACCAG GCCTATCTGC AGATGAGGAA ACTCATCTGG GAGAGGCCAA GCCCTCCACC 540
TGAAGTCCCA GTGAGTAGCT GAGTTACAGG TCTCAGATTC TAGAAACTTC CTCTGCGCCA 600
GCTGCCTCAA AATCGCAGTA AGGAAATTGG TGGTGTGGGC AAGTGGCATC ATGAGGCTCC 660
CCTGGAGCCT GTTCAGTGGT ACCGGGGCCC AGGCTGCTGG GAAGGAAGTG GGCAGGAAGC 720
GTCCGGAGAC GGCCCAATAC ACACAGGCCG CAGAGATGGG GGCCTTGAGA GGAACAGGAC 780
AGGACACACG GTGGCCCAGG GTTGTGGCAC ATGGGGAGGA GGGGTTTTGC AGAGCTGGGG 840
AGAGCACAGA CCACCGCGAG AGGCAGGTAC AATAGAAACA GGTGTACTTT GCGCATCACA 900
CAGAGGTGGG GACGACAGGC ATGGGGTGGG GGCGGTGAGG CAGGAGCGCA CCAGAGGATA 960
TGTGGGACCC GAAGGGGAGA GACGCATAAA AGCCGCAGCA GAGATGGGAG TACAGGGAGG 1020
GGAGGTCCCA ATGCCCGCTC ACCTCACCCC TTGGGGCCTG CCGGTGCCGG 1070
|
