| Tag | Content |
|---|
EnhancerAtlas ID | HS176-19120 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:44281310-44282400 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr19:44281475-44281495 | TGGGTGTGTGTGTGTGGTGT | - | 6.11 | | SNAI2 | MA0745.2 | chr19:44281992-44282002 | TGCACCTGTT | - | 6.02 | | ZNF263 | MA0528.1 | chr19:44282261-44282282 | TTTTCCATTTCCTCTTCCCCC | - | 6.03 |
|
| | Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
| SE_09619 | chr19:44280520-44286425 | CD14 | | SE_10575 | chr19:44280868-44284664 | CD19_Primary | | SE_11483 | chr19:44280226-44290091 | CD20 | | SE_13735 | chr19:44278824-44286216 | CD34_Primary_RO01536 | | SE_14657 | chr19:44276982-44289957 | CD4_Memory_Primary_7pool | | SE_18182 | chr19:44280271-44287023 | CD4p_CD25-_CD45ROp_Memory | | SE_18680 | chr19:44279319-44287337 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19217 | chr19:44280174-44289910 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20985 | chr19:44280759-44286788 | CD8_Memory_7pool | | SE_23897 | chr19:44281616-44282410 | Colon_Crypt_2 | | SE_27247 | chr19:44281696-44282381 | Esophagus | | SE_31804 | chr19:44281435-44282482 | Gastric | | SE_32542 | chr19:44280423-44286152 | GM12878 | | SE_33868 | chr19:44281020-44290170 | HCC1954 | | SE_34298 | chr19:44280305-44290264 | HCT-116 | | SE_34813 | chr19:44281207-44282337 | HeLa | | SE_39921 | chr19:44280212-44287484 | K562 | | SE_50403 | chr19:44281033-44282492 | Sigmoid_Colon | | SE_53761 | chr19:44280997-44282522 | Spleen | | SE_56117 | chr19:44281097-44282717 | u87 | | SE_59025 | chr19:44248893-44290143 | Ly3 | | SE_60730 | chr19:44257018-44289948 | DHL6 | | SE_62525 | chr19:44242576-44303622 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr19 | 44281524 | 44282142 | | chr19 | 44281490 | 44282375 |
|
Enhancer Sequence | AACAGGACAA CCCTGTCCAG ATGCTGGTGT CTACCCTCTT CCTCAGCTCT TCTCCCAAGA 60
CCCATACCCA TGAAGGGGGA CCTTGAAACT CACATTCCTT CTTATTCCTG TCCCATTTCA 120
CATCAAAAAT AGTTCTTCAG GTGTGTGTGT GTGTGTGTGT GTGTGTGGGT GTGTGTGTGT 180
GGTGTCTAGA AAAAGACATC TAGCCTCTAG AGAGTGCCCC CTCCCCTTCC CTTCCTACCC 240
ACCTGGTGTT GTCCTAGAAA CCAACTTCAA TCAACCCCAA CCCCAGATCT GGAAGAATGT 300
AGAAACTACC ATTCAATCCT CAAAGACTGA GTCACACCCT TCTCTGCTCT CATCCGGAGG 360
GCTGAGTCCC TGAGACCCAG CCTCAGCTCT GAGACAGCCC CCTCGGTTCT GCCCCCCTGC 420
AGCTCCCCAC TGCCACCCCT CTCTTCTGGC TCTAAGCCCA GGGCAGATCT GGCCGGAAGC 480
ACAGGGCCTC CAGAAACCAC GGAGAAATTG TTCCTTTTTT TTTTTTTCCT CTCTTTGTGT 540
GGCACAACCT TGGAGGAATC TAGAATTCTG GAGAGAGGGA TTTAGAGGGG ACTGGGACTG 600
TTGGATTTCC TAAGAGGGGT TGGTCCCTGC CTGGCGGGTA TTTGCAGGGG GAGGGGACCA 660
CCTGGGCGTC CTTACAAAGC ATTGCACCTG TTTCTCCTAA GAGGGCTGCC AGCTCCCCTG 720
GCTGGGCCAG CATCCCGCCT CTGAGCAGGG GAAGAGGGCC AGTTTCCTGC CCCAGGGGCC 780
TGCTCCCCAA CCCCCTATCA GAACAATAGT GCTGTTGTCA CCAGCCCTCC CCCACCTTCT 840
ATGGCTCCCT GGTTCCCTGC CTCTTTCTTC AGTCTGTCTT AACTGCCCAC ACCACTAGAC 900
AACAAGCTCC CTCCTCACAC TGCAATTTGC TTCTCTGGTG GTCCTCTCTA CTTTTCCATT 960
TCCTCTTCCC CCAAATCCCG GACCTGTCTG CACTTGGGCC TGTACTCTGT TCTCTGAATT 1020
TCCCTGTCTC TAGGGATGGT TGTTGCTGTC TTTCTATGTG TTTTGAGGGT CTTTGTTTCT 1080
ATTGTCTCTT 1090
|
