| Tag | Content |
|---|
EnhancerAtlas ID | HS176-19119 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:44269140-44270050 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr19:44269851-44269871 | TGGTTTGGGGAGGTTTGGGG | - | 6.99 | | RREB1 | MA0073.1 | chr19:44269841-44269861 | GGTATGTGGGTGGTTTGGGG | - | 8.75 |
|
| | Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
| SE_02767 | chr19:44268896-44270200 | Astrocytes | | SE_09619 | chr19:44267161-44274237 | CD14 | | SE_10575 | chr19:44268972-44272145 | CD19_Primary | | SE_11483 | chr19:44267220-44273841 | CD20 | | SE_13735 | chr19:44268644-44271503 | CD34_Primary_RO01536 | | SE_14657 | chr19:44268615-44271764 | CD4_Memory_Primary_7pool | | SE_18182 | chr19:44268629-44272248 | CD4p_CD25-_CD45ROp_Memory | | SE_18680 | chr19:44268558-44272624 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19217 | chr19:44268630-44272276 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20985 | chr19:44268851-44271784 | CD8_Memory_7pool | | SE_23510 | chr19:44269009-44269976 | Colon_Crypt_1 | | SE_27247 | chr19:44268619-44271203 | Esophagus | | SE_31804 | chr19:44268953-44269991 | Gastric | | SE_32542 | chr19:44266723-44271779 | GM12878 | | SE_33868 | chr19:44268905-44271368 | HCC1954 | | SE_34298 | chr19:44256799-44272203 | HCT-116 | | SE_34813 | chr19:44268615-44271135 | HeLa | | SE_37675 | chr19:44268467-44270470 | HSMMtube | | SE_39921 | chr19:44268698-44269880 | K562 | | SE_50403 | chr19:44268818-44272859 | Sigmoid_Colon | | SE_53073 | chr19:44268934-44271511 | Small_Intestine | | SE_53761 | chr19:44268902-44273559 | Spleen | | SE_56117 | chr19:44266358-44271787 | u87 | | SE_59025 | chr19:44248893-44290143 | Ly3 | | SE_60730 | chr19:44257018-44289948 | DHL6 | | SE_62525 | chr19:44242576-44303622 | Tonsil | | SE_64692 | chr19:44268872-44270949 | NHEK |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I043762 | chr19 | 44266826 | 44273433 |
|
Enhancer Sequence | CGTAGGAAGG AGTGTTTGCC AGCTAAAAGG GAGTGGAGGC AAGGAAAGAG AGGTCCCAGA 60
AGAATGAGTT TGGCAGGGGC TTTGGCAACA CTGCCAGGAG AGCTTCTTGC AGGGGAAGGG 120
TGTCAGCAAT ATCTGGAGGT CTCATCCAGT TCCTTTCTTG AGTCCCCGCC TTTACTCCCC 180
AGGTGGGCTG GCCTCCAGAG GAAGGGCAGT TCGTGGCAGT GGGTGGCGGA GGCTCCAATT 240
TAGCTCTCAG GGATGAAGGG GCGAGGCTGG CTGTGGACTT TAAGGGAAAT CCAAAGATAG 300
CTCAACAGAA AAGGATGACT CGCAGCCTGA TCTTCCCCTC AAGAGGAGGG AAGCAAGAAT 360
GAATCAGCCT CTCAAGCTGG AATGAAGTTG CGGCGGGAAG TCAGTCCTCG GTTTGTGGCC 420
CAAGGCCACT CTGCCTCTGA CTCACCTTGC AGTGGGGCGG GATGGGTGTG AATCTGGGCT 480
CTCCAGCCCG TATTCCTAGC TTCCGGCTGG GGGCCTGAGG GGAGGCCTGG CTCCTCTTGA 540
AACCTCGGTT TCTACATCTG TGCAGTGGGG TAACGAGGGT CAGGAGAGTG GTTATGGTGA 600
CTTATAAACA GAGCTGGGCA CACAGTAGGG CCTCTGGAAG TGCCAGCCCC CCTCCTTTGC 660
CCCCTTCCCT TTCACATCCT CTCTTGAGCG GATGTGAAAC GGGTATGTGG GTGGTTTGGG 720
GAGGTTTGGG GCCTCTGTTA GTCTCTTGAT GAGTGAGTTG TCATCTAGAT TCTGGTAAGG 780
CATGAATAGA GGGAGAAAAG CAACAAAAAA TCAGAAAAAG GGCAGCCACG CATTGTGTGT 840
GAAAATCAAA AACAATAATA AAAATGATTC TTGGCCAGGG ACAGTGGCTC ACGCTTGTAA 900
TCCCAGCACT 910
|
