| Tag | Content |
|---|
EnhancerAtlas ID | HS176-18821 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:18589380-18590420 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr19:18590302-18590317 | GAGGTCAGGAGTTCA | + | 6.22 |
|
| | Number of super-enhancer constituents: 28 | ID | Coordinate | Tissue/cell |
| SE_01013 | chr19:18588643-18590394 | Adrenal_Gland | | SE_04099 | chr19:18588738-18590106 | Brain_Anterior_Caudate | | SE_06012 | chr19:18587569-18592062 | Brain_Hippocampus_Middle | | SE_09318 | chr19:18587289-18593113 | CD14 | | SE_12155 | chr19:18588799-18590417 | CD3 | | SE_15037 | chr19:18589123-18590617 | CD4_Memory_Primary_7pool | | SE_17983 | chr19:18583928-18591813 | CD4p_CD25-_CD45ROp_Memory | | SE_19379 | chr19:18587487-18590403 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20439 | chr19:18584612-18591598 | CD56 | | SE_21047 | chr19:18588603-18591663 | CD8_Memory_7pool | | SE_22689 | chr19:18583973-18591671 | CD8_primiary | | SE_23893 | chr19:18589312-18590189 | Colon_Crypt_2 | | SE_26168 | chr19:18588425-18592741 | Duodenum_Smooth_Muscle | | SE_26932 | chr19:18588122-18592042 | Esophagus | | SE_31681 | chr19:18588601-18590332 | Gastric | | SE_41123 | chr19:18587807-18590387 | Left_Ventricle | | SE_41560 | chr19:18589244-18590155 | LNCaP | | SE_42344 | chr19:18587292-18590373 | Lung | | SE_44495 | chr19:18587274-18592340 | NHDF-Ad | | SE_46271 | chr19:18587413-18593123 | Osteoblasts | | SE_47511 | chr19:18588888-18589813 | Pancreas | | SE_47511 | chr19:18589872-18590274 | Pancreas | | SE_48120 | chr19:18587362-18592202 | Psoas_Muscle | | SE_48694 | chr19:18588545-18590349 | Right_Atrium | | SE_50125 | chr19:18585873-18593035 | Sigmoid_Colon | | SE_51145 | chr19:18587336-18592595 | Skeletal_Muscle | | SE_52434 | chr19:18585882-18592848 | Small_Intestine | | SE_53541 | chr19:18587934-18592552 | Spleen |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I018472 | chr19 | 18583787 | 18592442 |
|
Enhancer Sequence | TCACCCCCGC TGCTGTACTT CAGGCCAGGG CCCCAGGTGG GAGCTGGGGA GCCTGGTAGG 60
GCCGCCACAG CTGGCCTGAC ACAGTCAGCA GGTCAGCTGG GTCTTCAAGG CCGGACAGGC 120
AGGCACTGAG CTGTGCCGAG GCTGGTGCTC CCCAGACCCA ACTGGACTTC AGACCCTGAC 180
TCGGAGAACA GACCTCAACA CAGCAGGGCA GTGATGCCTG CGCCCTGCGG TCACTTGGCC 240
TGGGCGCCCA CTGGGGCTAC TGAACACAGA CTGGGAGACT CCTGTAGGCA GCTCCCCCTC 300
AATGAGGACA CTCCTGTAAA GACAGCAATG CCTTTGGGAA AAGGGTCGAG GGTGCAGAGC 360
CTGGGAGGCA GTGAGAGTCC TCAATGCTGA GACAGAGGAA AGGGTGAGGA GGAACCTCTC 420
CAGGGCCAGA ATCCCCTGAT CCTCTCCCCT CCGGCAAAGA GCACTTCCGG GGATGAAGCA 480
ACAGGAAGTG GCTTACGAAA TCCACCTCCA GGCCGAGTGA CCAGTTTACA GGAAGTGTGG 540
TGGGTGAATC TTCCCCAGGG CACGAGGCAA TGTCTGGAGC CATTTCTGGT CCTCACCACT 600
GAGGGCGGGG ACAGTCCCCA CCATCTGGCT CGGGGGAGGC CAGGGATGCT GCTCAGCACA 660
CTGCAGGCAA CACAGAACCT CCTGCCCCAA ATGTCAAGCA GTGCAGGGGC TGAGAAGCCC 720
TGGGCTGACC CTGCCACGGG AAGCGACCAT CAGAGCAGAA AGCAGAAAAA TCTATGGGAA 780
AAAAGACCTG CTCCCTTCAA CAAATATAAA ATATAAATGG AAAAGTTACG GGTGAAGAAG 840
AACGTATCTG ATTGTTGGCC AGGCATGGTA CCTCACACCT GTAATCCCAG CATTTTGGGA 900
GGCTGAGGCA GGTGGACTGC TTGAGGTCAG GAGTTCAAGA CCAGCCTGAC CAACATGGTG 960
AAACTCCATC TCTACTAAAA ATACAAAAAT TAGCCAGGCA TGGTGGCATA CGCCTATAAT 1020
CCTAGCTACT CGGGAGCCTG 1040
|
