Tag | Content |
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EnhancerAtlas ID | HS176-18809 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:18131910-18133600 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | + | 6.44 | MITF | MA0620.2 | chr19:18133079-18133097 | TGTGGTCATGTGACCACA | - | 6.44 | RREB1 | MA0073.1 | chr19:18132340-18132360 | CACCCCCCCACCCCCCACCT | + | 6.22 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_03528 | chr19:18131311-18133631 | Brain_Angular_Gyrus | SE_04156 | chr19:18130327-18135495 | Brain_Anterior_Caudate | SE_05027 | chr19:18129368-18135719 | Brain_Cingulate_Gyrus | SE_05917 | chr19:18129420-18135750 | Brain_Hippocampus_Middle | SE_07191 | chr19:18123490-18135726 | Brain_Hippocampus_Middle_150 | SE_08048 | chr19:18129556-18135507 | Brain_Inferior_Temporal_Lobe | SE_11531 | chr19:18130225-18136150 | CD20 | SE_17546 | chr19:18130687-18135928 | CD4p_CD25-_CD45RAp_Naive | SE_32095 | chr19:18130664-18133651 | Gastric | SE_33722 | chr19:18132360-18135625 | H2171 | SE_41200 | chr19:18130424-18135677 | Left_Ventricle | SE_42935 | chr19:18130491-18135643 | Lung | SE_48098 | chr19:18117499-18135641 | Psoas_Muscle | SE_48877 | chr19:18130441-18133652 | Right_Atrium | SE_50498 | chr19:18130482-18133715 | Sigmoid_Colon | SE_51440 | chr19:18125584-18135837 | Skeletal_Muscle | SE_55387 | chr19:18131327-18132959 | Thymus | SE_55387 | chr19:18132966-18133608 | Thymus | SE_61722 | chr19:18124231-18170119 | Toledo | SE_65475 | chr19:18130282-18133763 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 18133045 | 18133309 | chr19 | 18131991 | 18132570 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018019 | chr19 | 18130584 | 18136229 |
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Enhancer Sequence | CAAGCCCCCC TGCCTTGGCC CAGGGAGTTA TCTCCACCAG ATCCACCTTT CTGAGCGAGG 60 AGCTGGGTGC ATTGAGGGGC AGGGGCGGCT GGAGTTCAGA TGCACCTTTT GAGCGAGGGG 120 CTGGGCCTCT CTGTCGCTGG GCTCCAGGCA CAGGGCAGTC ATGATGTACA CACACACGTG 180 CAAACACACA CGCACACACA TAAGCCTGTC AGCAACATAG AAACACCAGC CAGTGAACTC 240 GGGCACAAGC AGCCGGGCAC AGAGTGTTCA CCAGGTGCTC ACATGTGGAG TACCCCAACT 300 CCTAGGAGGA TGCGGTTATG GCCTGGATCC TACAGGTGGG GCCCAGACAT GGGCTTTGAA 360 CCCACGCCAG GGTATGCACA AACCTATCCA AACACACGCG TGTCTGCCCT AGCTTCCCTC 420 ACCCGGGAGT CACCCCCCCA CCCCCCACCT TGTTTTTGAT GTTCAGGAAA GTCCCCAGAA 480 AGCACTGGGC CCGGGCAAGG GGCCAGGAGG AAATGGTGAC TCAGCCGGTG GCCATCAGTG 540 CCTGCCACGC TGGGCTGGGT GGACTGCGCG GCCCGATCTG GGAGGATCCA CAGAAAACAA 600 CAATAAAAGA TGAGGGCGTG GGTGCGGGGT AAAAAGGACT CAGCCCAAGA ATGATCAGAG 660 AGGGGATGGA TCCCCCTGTG CTCCAACACT TCAACCCTGC TGGGCCTGAT TGACAAGTGG 720 GGAAACTGAG ACACAGGGAA CAAGTGACTT CGCCAAGGCC CACCAGCCAA GATGGTACAG 780 GCAAGGGGAT CCCTAAGTCC TTAACACAGG GGTCTGGAGG AATGTCTACC TGCCCTGCCC 840 TTTTTTTTTT TTTTTTTTTT GGAGACAGGG TCTCACTCTG TCCGTCAGGC TGGAATGCAG 900 TGGCATGATC TCAGCTGACT GCAATCTCCG CCTCCTGCCT CAGCCTCCCA AGTAGCTGGG 960 ATTACCGGCG CCTGTCCCTA TGCCCAGGTA ATTTTTGTAT TTTTAGTAGA GATGGGGTTT 1020 CACCATGTTG GCCAGGCTGG TCTCAAACTC CTGACCTCAG GTGATCTGCC CACCTCGGCC 1080 TGCCAAAGTG CTGGGATTAC AGGCGTGAGC CACAGTGCCC GGCTCCCTGC CCCACTTTCT 1140 GAGACCCAGA TCCACTTCCT GGTTTCCTGT GTGGTCATGT GACCACACTT GGCCAATTGG 1200 AGCCTTTTGT TATCACAGGC ACAGGGATTG GGTCAGGGCT GGGCACGTGA TCCTGCCTGA 1260 GCCAATCATG CTACGAGTTT GGAGACTCCC TGGAAGAAGG CCTAGAAGTA AGGAAAACCA 1320 TCTTGGACGC ATGATGATGG CAGTGGATCA GAGTCCCAAG GACACTGGTG AAGATCAGAG 1380 CAGGACTCAC ACAACCTCAG ATCCCTGTGG AGTCAGGGTG GAACCAGAGG GAAGGCTGAA 1440 GGCTGGAGGG TCCTGAGAGG CCTTGCAGAA AGAGAGGACA TTGGAGCTGG GGCTTTGATG 1500 GATGAAGAGG AACTAGGGAA AGGCATTTCA AGCAGAGGGA ACAGCCTGTG CAACCACAGC 1560 AGGCAGGTGG GAGCTAGGCG TGTCCTCAGC CACCCCAGTG GCCCCATGGG GCTGGAGCAT 1620 AGAGAGGCAT CTGCAAATGT GTTTATTTGT TTATTGAGAC GGAGTTTTGC TCTTGTTGCC 1680 CAGGCTGGAG 1690
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