| Tag | Content |
|---|
EnhancerAtlas ID | HS176-18785 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:17218080-17219470 |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| JUN | MA0488.1 | chr19:17218618-17218631 | ATGACCTCATCCT | - | 6.23 | | JUND(var.2) | MA0492.1 | chr19:17218617-17218632 | CATGACCTCATCCTA | - | 6.25 | | SRF | MA0083.3 | chr19:17218657-17218673 | TTTCCAAATAAGGTCA | + | 6.01 |
|
| | Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
| SE_01070 | chr19:17217900-17219642 | Adrenal_Gland | | SE_01695 | chr19:17217904-17219751 | Aorta | | SE_07171 | chr19:17217875-17219856 | Brain_Hippocampus_Middle_150 | | SE_09204 | chr19:17217853-17225810 | CD14 | | SE_11414 | chr19:17210931-17224728 | CD20 | | SE_32165 | chr19:17217911-17219588 | Gastric | | SE_32675 | chr19:17215550-17218465 | GM12878 | | SE_42559 | chr19:17217842-17219831 | Lung | | SE_44945 | chr19:17217893-17219831 | NHLF | | SE_45910 | chr19:17217694-17219939 | Osteoblasts | | SE_50282 | chr19:17217887-17219656 | Sigmoid_Colon | | SE_52769 | chr19:17217885-17219586 | Small_Intestine | | SE_53370 | chr19:17217871-17219778 | Spleen | | SE_59337 | chr19:17188995-17222500 | Ly3 | | SE_62772 | chr19:17177847-17247718 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I017106 | chr19 | 17217795 | 17222204 |
|
Enhancer Sequence | GAGAGGGTAG ATCCAACATT TACCATGTCA GACATTTTGC CAAATGGGAC TAGGCAGGTG 60
GGTAAATGCC TGAGCCCCGC AGAAATGACA CGCCCAGCCC CAGGGTCTCA AAGTGGCACG 120
GCCAGGAGGC AGGATTGCCA CCTAGGTCTC AGTTCAGGGT CCATGTCCTC CCCACCACGT 180
TGCTGCCTCC ACAGCGCCAT CTCACTAGGA CCCTCCAGGG CGTGGACAAG TTTCCTGTTG 240
CTAAGTGTTA GGGGCAAGGG AGTCTCCAAC AACAGGGATT AAGGCTCTCA TGGTCCTGGA 300
GGCCAGAAGT CTGAAATCAA GGTGTCCACG GGGCCGCACT CCCTCCCGGC TCTGGGGGAG 360
GATGCTTCAG GCCTCTTCAG CTTCTCTGGT GGCTGCAGAT GTGCCCTGGC CTGTGGCCAC 420
GTCACATCAG TCTCTGCCTC TGTCGTCAGG GGCGTTCTTC CTGTGTGTCC ATGTCTTCAC 480
GTGGCTTTCT TATAACAAGG ACACCACTCA TGGGATGTAG GGCCCATCCT ACCCCGGCAT 540
GACCTCATCC TACCTAATTG CATTTGCAAA GACCCTATTT CCAAATAAGG TCACATACAC 600
AGTTTCTGGG GGTGAGGATG TGGATATAAT TTTGGGGGCG GGGGGCTCAA GTCAGCCCAC 660
AGCATCCCCC ATACAGCCCC ACCTGGTCTG CTTCAAGTCC TACCTGGCCC CTGGCAAGTC 720
CCACTTGGTG ACATCTTGTG CCTGGGTCCT TGAGGGCTGC CCCAGATCCG CGATTGTCCT 780
GGGGACCGGT AGTTCCTCCC CGGATGCCAG CAAAGCTCCC TCCAGCCTCC ACGCCTGCAC 840
AGTCTCCAGT ATGCCTTCAA CAGCCATTAG TCACCCTCTG TGAGTCAGAC CCCCGGTCCT 900
GCCAGGCCAA CCTGCTTGGG GCCTCAGCAG CGGGGGCTGG CGAGGCCAGT TTTCTCCAGC 960
GGTTCTAAGC CGCTCGAGGG TGGTGCCCAC GCCGGCTTCC AAAACAGGCT TGAGCCAAAT 1020
CCACGTCATG GCAATAAACG TGCTTCCTGG GGCGACTGTT TGCAAAGGGA TGTGATTGTC 1080
TTCACTGAGA GCTGGATTTC TCAACCTGGC TCTGCTGACA TTCAGGGCCG GATCGTTCTC 1140
TGGGGAGGGA GTCATCCTGT GCATTGAAGG ACATTGAGCA GCATCCCTGG CCTCCACCCA 1200
CCAGATGCCA GGAGCACTCC CCACCCCGCA GGTGTGACAC CCAGAAGTGT CCCCAGACAT 1260
TTCATTGATT AGAGAGGTAT TAACAAAATA GCTTCCCGTT GTCCCCTGGG GACAAATCAC 1320
CCCCTGGGAA TAGAACAGCT GTCTTTGAGT TCTTCCCATA AGACCCAATC ACTGTTCATT 1380
GCAGCCACTG 1390
|
