| Tag | Content |
|---|
EnhancerAtlas ID | HS176-18776 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:16448860-16450590 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr19:16450509-16450524 | TGAACTCCTGACCTC | - | 6.22 | | RUNX3 | MA0684.1 | chr19:16449876-16449886 | AAACCGCAAA | + | 6.02 |
|
| | Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
| SE_02121 | chr19:16448235-16450623 | Aorta | | SE_11761 | chr19:16448597-16450448 | CD20 | | SE_14486 | chr19:16448358-16450704 | CD4_Memory_Primary_7pool | | SE_15424 | chr19:16448830-16450328 | CD4_Memory_Primary_8pool | | SE_15819 | chr19:16449013-16450244 | CD4_Naive_Primary_7pool | | SE_16376 | chr19:16448709-16450527 | CD4_Naive_Primary_8pool | | SE_17319 | chr19:16448094-16450433 | CD4p_CD25-_CD45RAp_Naive | | SE_19662 | chr19:16448483-16450678 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_20477 | chr19:16447136-16450765 | CD56 | | SE_20801 | chr19:16448268-16450591 | CD8_Memory_7pool | | SE_21459 | chr19:16448569-16450058 | CD8_Naive_7pool | | SE_22931 | chr19:16448097-16450690 | CD8_primiary | | SE_30197 | chr19:16449039-16450309 | Fetal_Muscle | | SE_31861 | chr19:16449060-16450155 | Gastric | | SE_37239 | chr19:16448480-16450955 | HSMMtube | | SE_38557 | chr19:16448117-16451385 | HUVEC | | SE_41301 | chr19:16448493-16450620 | Left_Ventricle | | SE_42601 | chr19:16448631-16450689 | Lung | | SE_45405 | chr19:16448360-16450644 | NHLF | | SE_49016 | chr19:16448672-16450633 | Right_Atrium | | SE_53383 | chr19:16448370-16450551 | Spleen | | SE_61491 | chr19:16432573-16510994 | Toledo | | SE_62295 | chr19:16434424-16512260 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I016337 | chr19 | 16448221 | 16451210 |
|
Enhancer Sequence | GAAGCACCCC AGCCTGCCCC GTGCCAGCTT GGACCTCACA GGGTGGGAGC GCCAGATCTG 60
TGGCTGGCTC CTCCTTCCCA CTAGACTGGG CAGCAGCAGA GAGGGGTGCT GAATGACTCG 120
GGGGACCTGG TTGACAAGGG GTCAGGACCG TGAAGGGGAC AGTGGTTTTA CTCCCCTGTC 180
ATAGTCACAG AGAGCAACAC ACAAAATCCA AGGATTCCTG GGATGACAGA ATTTCTGACC 240
TCAAGGCCAA GATGATGCTG GGTAGAGTGT GCAGCGTGTA GTGTAGACGG GGACTTGGAT 300
CCGCTGGCCC TGGCTGCCTG GAGATGCTGG GTAGAGCACG TAGTATGCAG CGTAGACAGC 360
ATTCAGAGTC CCTCAGCCCT GGCTGCCCCT ACCTCTGCCC CTTGCCCCTG GCCATGGCCC 420
TGGGCGCACG CCTGGCCCTC TCTGAGCCAC AGCTCCCTCC CACCAGGGCT GGTGAGAAAA 480
GTAAACCGAG AGTGCTGTTT CCTGCCACCC TGCTGGGTGC TCAGCCTCCC TCCACCCGCA 540
TCCTCTCGAG TGGGTAGAAT CCCAACTGGG GGCCCTCTGG CAGGGTCCGG GAGCTGGCAC 600
ACGAGCAGGC ACTCTGGCTC GGCCATGCAT CCGTCCATGG GCCACTCGCC GAGACACGTG 660
GCTCTAAATG GACACAGTCA TTCAGGAAAT AGCGCCTCGC CCACCGAATG CCAGGCGCCA 720
CTCAGCAGGC TGCTGTAACT CCGCAGGCTG CCTCCTGAAT TGCCCTCCAC TTTCAACCTT 780
GACCCCAGGT TGGCCTTTCT GGGGACTGTC CCAAGATCGA GAGACACACT TCACAGCCAA 840
GCCCTCGTCT GCAGCCTCGG AGCTATGAGA TGTTCCAGCT CCAGGGAAAA AACTCAGGAA 900
TCAGAAGTCT GGCCAGCCCC ATCCCACTCC TCTTGGCTTT AATGTAACTC AGAGGCACCG 960
ATCCTGGCTC TTGGGGCAGA ATTCTCCACA TTCCTGGTGT GTTTCCGTTG AACCCCAAAC 1020
CGCAAACACA TCCTGACATC TCATTTCCTC AATGTGCCCT GGTGGTGACT CGGGCCACCT 1080
TGCCGGGAGC TCGTTTTGAG TCATACAGAG ATTTGTCGAA GGAAGGGTTT CTCATCTCAG 1140
AAGTTGGAGG CCGTTCCCAC CAACCTCCCT CCCTGCATCT GTACAAGAAT TGCTGGCGGG 1200
GCTGCTATTC CCTGATGCTT GGATCTGAGC TCTCAGTGAC TCGGGAGGCA CTGGCCAGGG 1260
GCCCTGGACA AATCTAAGCT CAGTTCCTTA TGTCACCACT GTCAACCTCA GGCACGGGAA 1320
GGCGGCTCTC AGTCTCTTTC CTCCTCTGTA GAGCTGGGCT CTTAGCAGCT ATCTTGGCCG 1380
GGCTCTATCT CAAATGGATG GAATCTGGGC TATGCCTGAC ACATAGTAGG TGCTCAGTGA 1440
AGGAATGGTG CCCATTAGTG AGAGAGGGAG ACAGGGCTGG GCATGGTGAT GTGCACCCGT 1500
GGTCCCAGCT ACTTAGGAGG CTGAGGCAGA AGGATCCCTA GAGGCCAGGA GGTCGAGACA 1560
GCAATGAGCT ATGATTGCAC CGTTGCACTC CAGCCTGGGC AACAGAGCAA GACCCTGTCC 1620
TTAAAATAAT AATAGTAATA ATAATTTATT GAACTCCTGA CCTCAGGTGA TCCACCCGCC 1680
TCGGCCTTCC AAAGTGCTGA GATTACAAGC ATGAGCCACT GTGCCTGGCT 1730
|
