| Tag | Content |
|---|
EnhancerAtlas ID | HS176-18523 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr19:3336360-3337640 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| STAT3 | MA0144.2 | chr19:3336600-3336611 | TTTCCCAGAAG | - | 6.62 | | Six3 | MA0631.1 | chr19:3336476-3336493 | ACTGTTGATACCCAATT | - | 6.27 | | Stat4 | MA0518.1 | chr19:3336597-3336611 | TCATTTCCCAGAAG | - | 6.44 |
|
| | Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
| SE_00151 | chr19:3334565-3339336 | Adipose_Nuclei | | SE_00856 | chr19:3335211-3338011 | Adrenal_Gland | | SE_05012 | chr19:3336904-3337887 | Brain_Cingulate_Gyrus | | SE_05799 | chr19:3335139-3338163 | Brain_Hippocampus_Middle | | SE_06831 | chr19:3336526-3337854 | Brain_Hippocampus_Middle_150 | | SE_24506 | chr19:3335232-3337869 | Colon_Crypt_2 | | SE_26532 | chr19:3334528-3338119 | Esophagus | | SE_31377 | chr19:3335157-3338212 | Gastric | | SE_40606 | chr19:3335177-3338156 | Left_Ventricle | | SE_42110 | chr19:3335224-3338192 | Lung | | SE_46931 | chr19:3335225-3337850 | Ovary | | SE_47457 | chr19:3335220-3338096 | Pancreas | | SE_48051 | chr19:3334972-3338042 | Psoas_Muscle | | SE_48561 | chr19:3335198-3338131 | Right_Atrium | | SE_50148 | chr19:3335193-3338115 | Sigmoid_Colon | | SE_53320 | chr19:3335604-3337940 | Spleen | | SE_54509 | chr19:3332917-3338318 | Stomach_Smooth_Muscle | | SE_65251 | chr19:3335050-3341018 | Pancreatic_islets |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I003335 | chr19 | 3335221 | 3339206 |
|
Enhancer Sequence | GTTTGGGACT CCAGGGAGAG ACACAAACCG TGAATTAAAA TGTTAACGTT CAAGAAGGAT 60
GAATGCTATA AAGAGAAATG AAACTATCGT TAGATCTTAT TATTGTTGTG ACTGTTACTG 120
TTGATACCCA ATTGATCGTG ATTATAGCCC TGATTCCAGC TTCCACAGTT ATTGGAGGTA 180
TGCAATTATT TAGCACCAAC TGTGTACCAG GCTCCAAATA CCTATAGCCC CACAAAATCA 240
TTTCCCAGAA GAGAAACCAA GGTCTCAGGT CTGTCCAAGA TTGTGAGCTG GTTGTGCAGG 300
GCAGGCCTGG GAGTGGATCT GCCAGATGGC ACGATTCCCG GACCTGCCCC CACCTCCCAG 360
GGGGAGCTGG CATCCTCCCA GCTGGACCTG GCCCCCCCTT GGAGCTTCCC CAACCTGGGG 420
ATACAGAAGG GCCCCCACGG GGAGGGAGGC AGCCAGGGCA GGCAGTGGCA CAGAGCAAGG 480
AGGGAGCAGG GCGTCTGCCA CCCGCCCCCA CGGCTGCCTG GGAAACGCCA CGGCCTAATC 540
CTGGCTCAAG AGGACACGTT GTACCAGAGA TTATATAAAC CGACCTCTCC CTTTGTTTGT 600
TTAATTCTTT CAGGCTTTTT CCCTCATCCT TCTCTCTTTA ATCGCTCTGC CAACAGGGCT 660
GGGGGTGGGG TGCTCCGGGC TAGGCCTCTT CCAGGAGGGA GGGGGCTGCA TACCCAGCAC 720
CCCCCACTCT GGTCATACCC CTACCTGGTT TCCCAGCCAC CCAGGCCCGC TCCTCCCCCA 780
GTCACACACA CCAAGTCCTG CCGGTGGCAG GGGTGTGGGG CTGGACAGGC TTGGCCAGTG 840
GAGTGAGTCT GAGAGGCCAA GGCCAAGGGC ACTGAGTCAG GCTCGGACTC TGCTGGGCCC 900
CTAGGATGTG GCCTCTCCAC TTGGCACTCA GCTTCCTCTT CCAAAAAAAT GGGATCCCTG 960
TGGTCCCAAC CCCCAGGTTG TTGAGAACAC GCCCATGCAA GGAGTGAGCA TGGCCCATGG 1020
TGGATGCCGG GTGAGAGCCG CTGCCTGCTC CCAGCCCACA CTACAGACAC CCAGGGAACA 1080
GTTTCGCCCT CAGACTGGCC CTGGAGCACC GTGACTGTGG TGGCCAATTG GGCCTCCGAG 1140
ATGTCCACGA TGCCTGGTGG GTGCTCTGAT GTGGAACACT GGGCACCATC ACCCAGAGAG 1200
GGCAACCAGG GGTGTCTGGC TTTGTGCTCA CCCACCGCTG ACCCCGAGCC TGGCCCTGGC 1260
CCTCACCAAG ACCCAGTATT 1280
|
