EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-18462

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr19:886200-887690

Target genes

Number: 26
Name	Ensembl ID

HCN2	ENSG00000099822
RNF126	ENSG00000070423
FSTL3	ENSG00000070404
PALM	ENSG00000099864
R3HDM4	ENSG00000198858
MED16	ENSG00000175221
PTBP1	ENSG00000011304
LPPR3	ENSG00000129951
CFD	ENSG00000197766
ELANE	ENSG00000197561
AZU1	ENSG00000172232
SHC2	ENSG00000129946
TPGS1	ENSG00000141933
CDC34	ENSG00000099804
BSG	ENSG00000172270
HMHA1	ENSG00000180448
POLR2E	ENSG00000099817
GPX4	ENSG00000167468
CIRBP	ENSG00000099622
C19orf24	ENSG00000228300
MUM1	ENSG00000160953
EFNA2	ENSG00000099617
NDUFS7	ENSG00000115286
GAMT	ENSG00000130005
DAZAP1	ENSG00000071626
RPS15	ENSG00000115268

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr19:886211-886229	GGGAGGGAGGGAGGAGGG	+	6.27
Nr5a2	MA0505.1	chr19:887443-887458	GATCTCAAGGTCAGG	+	6.34
RFX1	MA0509.2	chr19:887257-887273	GGTTGCCATGGCGACG	+	7.31
RFX1	MA0509.2	chr19:887257-887273	GGTTGCCATGGCGACG	-	7.31
RFX2	MA0600.2	chr19:887257-887273	GGTTGCCATGGCGACG	-	7.37
RFX2	MA0600.2	chr19:887257-887273	GGTTGCCATGGCGACG	+	7.62
RFX5	MA0510.2	chr19:887257-887273	GGTTGCCATGGCGACG	+	7.28
RFX5	MA0510.2	chr19:887257-887273	GGTTGCCATGGCGACG	-	7.28
ZNF263	MA0528.1	chr19:886209-886230	AAGGGAGGGAGGGAGGAGGGG	+	6.21
ZNF263	MA0528.1	chr19:886205-886226	GGAGAAGGGAGGGAGGGAGGA	+	7.9
Zfx	MA0146.2	chr19:887427-887441	GAGGCCGAGGCGGG	-	6.01

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr19

887120

887362

Enhancer Sequence

ACTGTGGAGA AGGGAGGGAG GGAGGAGGGG CCGCTCAGGC TCATGGGGGC TGCCCCATGA 60
CCCCCAGAAA CACGCGCACA GAAGAACCAC GCAGAAGCCA GGAGTGTGTG CACCTGGGTT 120
CAGATCCTGA CTCGGCCACC TGAGCCGTGT GGGATGTGAT CCCCTCTGAC CCTCCGTCTC 180
CTCATCTGTA AGGTGGAAGG AACGGCACCT TTGCTTTAGA GGACAGTGGG GAGGATTAAA 240
CGGGTGAACG TGTGCGCAAC GGGAGTCACC TCCCCTTTCT GTAAAGGGAC AGACAGCAGC 300
ATGCTCGGTT CTGGGAGCCA GGTGGTCCCT GTTGCAACGA CTTGGCTCTG GCTCTGCCGT 360
GGCGGCACAC AGGCAGCTGG TGCCAATGAG CCACACTCAC AAACCCAGGC GGGGGCCGTC 420
AGGCCCTGGG CCGCACTGTG CAGACCTGAG CTATAGCACT CAGGAAGTGC TGTGTAAGCA 480
CCAGCGGCTG CTGCGGGCAC TATTTGATTT CAAATCAAAT TTGTCAAGTC ATTATTGACA 540
TACGGAAACA TCCACCCTTC TTTCAACGTG AGTCTTTTAA AAGATGGGGT CTTGGCTGCG 600
CACGGTGGCT CTCGCCTATA ATCCCAGCAC TTTGGGGGGC TGAGGCAGGT GGATCCCCTG 660
AGGTCAGCAG TTCAAGACCA GCCTGGCCAA CACAGTAAAA GCCTGTTGCT AATAAAAAAT 720
ACAAAAAAAT TAGCCGGGCA TGGTAGCGGG TGCCTATAAT CCCAGCTACT CAGGAGGCTG 780
AGGCAGGAGA ATTGCTGGAA TCCAGGAGGT GGTGATTGCA GTGAGCCGAG ATCACACCAT 840
TACACTCTGG CCTGGGCAAC GAGAGCAAAA CTTTGTCTCA AAAACAAAAA AAAAAAGAAC 900
AAGAAAAATG TCTCTACGTT GTGAAAAAAT GCGAGGAAGA GAAGTGTATC ATACGTATCG 960
TACGGCTCCA TTCTAAGTTA CAAGTTAAAA AAAAACACTT CTTATAGCAA GAAGCAGGTC 1020
CAGAAGTCCA GGAAGCAAGC CAGGCCTGGT GGTGAGGGGT TGCCATGGCG ACGACTCATC 1080
TGGTGTCCAC ACCACACGTC TGTGTGGGTC GCAGGCTGGC ATGTCTGAGA CTATGTTAAA 1140
GGAGCACATG TGCCTTTTAT TAATGTAATT AAAAAACAAA AATTTGGCCG GACGCGGTGG 1200
CTCACGCCTG TAATCTCAGC ACTTTGGGAG GCCGAGGCGG GCAGATCTCA AGGTCAGGAG 1260
TTCGACACCA TCCTGGCCAA GATAGTGAAA CCCCGTCTCT ACTAAAAATA CAAAAATTAG 1320
CCGGGCGCGG TGGTGCGTGC CTGTAATTCC AGCTACTCGG GAGGCTGAGG CAGGAGAATC 1380
ACTTGAACCT GGGAGGTGGA AGTTTCAGTG AGCCGAGATC GCACCACTGC ACTCCAGCCC 1440
GGTTGACAGA ACAAGACTCT GTCTCAAAAA AAATGTATTT GGTTATTTTA 1490