Tag | Content |
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EnhancerAtlas ID | HS176-16788 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr17:55955240-55956970 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr17:55955445-55955463 | ACTTCCCTCCCTCCTCCC | - | 6.05 | Nr2f6(var.2) | MA0728.1 | chr17:55956246-55956261 | TGAACTACTGACCTC | - | 6.07 | RARA | MA0729.1 | chr17:55956243-55956261 | TCTTGAACTACTGACCTC | - | 6.1 |
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| Number of super-enhancer constituents: 39 | ID | Coordinate | Tissue/cell |
SE_03878 | chr17:55950042-55956010 | Brain_Anterior_Caudate | SE_03878 | chr17:55956245-55959769 | Brain_Anterior_Caudate | SE_04783 | chr17:55943537-55956092 | Brain_Cingulate_Gyrus | SE_04783 | chr17:55956096-55961004 | Brain_Cingulate_Gyrus | SE_06590 | chr17:55943471-55960413 | Brain_Hippocampus_Middle | SE_07738 | chr17:55949624-55958078 | Brain_Inferior_Temporal_Lobe | SE_25794 | chr17:55954886-55959515 | Duodenum_Smooth_Muscle | SE_27772 | chr17:55956423-55959989 | Fetal_Intestine | SE_28796 | chr17:55956222-55960267 | Fetal_Intestine_Large | SE_29569 | chr17:55956183-55960712 | Fetal_Muscle | SE_31404 | chr17:55956470-55957264 | Gastric | SE_33448 | chr17:55950667-55958164 | H2171 | SE_34179 | chr17:55956198-55957251 | HCC1954 | SE_34254 | chr17:55956128-55959730 | HCT-116 | SE_35331 | chr17:55956169-55958233 | HepG2 | SE_37539 | chr17:55955227-55958306 | HSMMtube | SE_38977 | chr17:55956158-55960130 | IMR90 | SE_40601 | chr17:55950532-55956029 | Left_Ventricle | SE_40601 | chr17:55956187-55959902 | Left_Ventricle | SE_42102 | chr17:55955210-55956014 | Lung | SE_42102 | chr17:55956229-55960103 | Lung | SE_44235 | chr17:55955071-55959711 | NHDF-Ad | SE_44887 | chr17:55955168-55955961 | NHLF | SE_44887 | chr17:55956016-55959576 | NHLF | SE_46579 | chr17:55955153-55959649 | Osteoblasts | SE_47384 | chr17:55950105-55960103 | Panc1 | SE_48056 | chr17:55955055-55960204 | Psoas_Muscle | SE_51111 | chr17:55956084-55960134 | Skeletal_Muscle | SE_52082 | chr17:55956033-55957874 | Skeletal_Muscle_Myoblast | SE_52598 | chr17:55956285-55957177 | Small_Intestine | SE_54487 | chr17:55943323-55956053 | Stomach_Smooth_Muscle | SE_54487 | chr17:55956104-55960313 | Stomach_Smooth_Muscle | SE_56380 | chr17:55955156-55957753 | u87 | SE_63290 | chr17:55922884-55976538 | NCI-H82 | SE_63875 | chr17:55955581-55957945 | HSMM | SE_65273 | chr17:55954898-55955555 | Pancreatic_islets | SE_65273 | chr17:55955619-55956425 | Pancreatic_islets | SE_65273 | chr17:55956549-55957557 | Pancreatic_islets | SE_67933 | chr17:55955156-55957753 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I057877 | chr17 | 55955267 | 55960716 |
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Enhancer Sequence | GACTCAAAAA AAAAAAAAAA AAAAGTCAAA GAAAGGAAAA TCATTTAGCC CAGGGCTCTG 60 TGATCTATCC CAGGCTGCAA GTCCTGCCTA GGTCTCACCC AGACCCACCC ACTCATTCCC 120 CACCTCCCAC TCCAGTACAG CCTGCCAGCT CCTGGTACCA CTCGTGACAA AGATCCCAGC 180 TCTGTTCCTG TCCCTGACTC AAAACACTTC CCTCCCTCCT CCCCTCAGTA ACTTTCTAGG 240 ACTCTATGAG CTCCGTAAGC TGCAATCACA GAGACTTTTC TCATTCGGGA GGTGACAGGA 300 CACAGCAGTG AAGAGTGATT AGCTTTAAGT CAGAATGACC TGGATTCGAA CTCCAGCTCT 360 TAGTCTTGGG GAAGTTATGA AATCTCTCAA GGCTCAGTTT CCTCGTCCAT AAATAGGGGT 420 GATGACAACA GTGCCCGCCT CTGCATTAAA TGTGATGGTG TAGGTAAAGA ACCTGCTCCG 480 TTTCTGGCAT TGGAAGGGTG CTTAGTCAAT GCTAGCTACA CTTGTATGAT AACAGAGTTC 540 ACCACTGCTC TGGGGCTGTT CTGGGGAGAA GGGAAGATCT AACTGGGACA GGTGCCCTGT 600 CCCATCATCT CCCCACCCCC TCACCACTCC AGGCCTGAGC CATTCTAAGA AACAGCAGCT 660 CTAGGGCAAA GAGGTCACAC CCCAGCTCCA GCAGCCCCAG CACAAATGTG GAGCCCAGAA 720 AAACAAGCAC CCCGGAGACC CATGGGATCT TCCTGGCAAC TACCTTGATT ATTTATTTAT 780 TTATTTATTT ATTTATTTAT TTATTTACTG AGAGTCTCAC TCTGTCACCC AGGCTGGAGT 840 GCAGTGGCAC CATCTTGGCT CACTGCAACC TCCGCCTCCG GGGTTCAAGC GGTTCTCCTG 900 CCTCAGCCTC CCAAGTAGAT GGAATTACAG GCATGCGCCA CCACCCCTGG CTAATCTTTG 960 TATTTTTAGT AGAGATGGGG TTTCACCATG TTGGCCAGAC TGGTCTTGAA CTACTGACCT 1020 CAAGTGATCC ACCCACCTTG GCCTCCCAAA GTGCTGGGAT TACAGATGTG AGCCACTGTG 1080 CCCAGCCTAG CTTCATTTTA AGCTTCCAAA TTACAGAGTC TCTAACCTGG AAGAAGTTTC 1140 CAGGGACCTT GCAGTCTACC TCCCTGCCTC CAGTTATCAA ACTACCTTAA TGAAAGAGAC 1200 TTGCTCTCAT TGCTTAAAAA TCCTCACAAT ATCCCTAGCC CAAGGATGGC AGCTAGCCAT 1260 TCCATCAATT ACTGATGACT GGCTGGGAAT GCTGTGTTCT GTGTTAAGGA GGATCTGAGG 1320 CTCTGTCTTG ACTCAGCAGG AAAGAGCACA GTGATGAATC AGCCATGTTT GCTGTGGGCT 1380 TGGGAGGGGA AGTGCCAATA CACATTCCCT GTTTGTCATT CCTACTCTGG CATCTCCCTT 1440 GACTATAAGC TCCCAGAAAG CAGAGGCTGA GCTTTACTTA ACTCTGTGTC CCATATGGTA 1500 CCAGACATAC CGCCTAGCCT AGAGTAGGAA TTTAGGAAAT GTTTGCTCTT GCAATCCTTA 1560 CATTTTGCAA GTTCTCCTTG GTATCTAGCT AAAATGTCTC TTGCTGCAGT AGAAGCCTGT 1620 TCTTTGAAAT ATACTGAGCA GTCCAGCCAA GTTTCGTGTT GTTTGTACAC AGCCCCAGCC 1680 ACTGATCCTC TTCCCTGCCA CCCTGTGCTC TGAGACATGA CAGATTCTCA 1730
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