Tag | Content |
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EnhancerAtlas ID | HS176-16140 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr17:28049360-28051380 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
DUX4 | MA0468.1 | chr17:28051134-28051145 | TAATTTAATCA | + | 6.62 | GATA2 | MA0036.3 | chr17:28050533-28050544 | GAAGATAAGAA | - | 6.02 |
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| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_00091 | chr17:28045681-28051592 | Adipose_Nuclei | SE_04346 | chr17:28049764-28051340 | Brain_Anterior_Caudate | SE_05391 | chr17:28049551-28051445 | Brain_Cingulate_Gyrus | SE_07345 | chr17:28047026-28051309 | Brain_Hippocampus_Middle_150 | SE_09243 | chr17:28042414-28052463 | CD14 | SE_10472 | chr17:28045694-28052232 | CD19_Primary | SE_10996 | chr17:28029408-28057228 | CD20 | SE_18775 | chr17:28047974-28051610 | CD4p_CD25-_Il17-_PMAstim_Th | SE_20563 | chr17:28047036-28052191 | CD56 | SE_23030 | chr17:28048087-28052234 | CD8_primiary | SE_30972 | chr17:28046914-28052405 | Fetal_Thymus | SE_41508 | chr17:28048268-28051414 | Left_Ventricle | SE_43139 | chr17:28049422-28051322 | Lung | SE_48078 | chr17:28048278-28051210 | Psoas_Muscle | SE_51084 | chr17:28048062-28051459 | Skeletal_Muscle | SE_54418 | chr17:28047421-28051997 | Spleen | SE_55620 | chr17:28049223-28051345 | Thymus | SE_58538 | chr17:28008486-28106930 | Ly1 | SE_62296 | chr17:28008388-28106801 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I029718 | chr17 | 28045771 | 28052417 |
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Enhancer Sequence | CATGTTATAT GTCTTACTTT TAAAAAGTTG GATCTCAGCC ATACTCTAGA GTACTTGGGT 60 TTCAAAAGTC AGAAAGGAAA ATAAAAATAA GGACTCATCG ATGGAGTACT GATAAGCTGC 120 AATGTCCTTT GAGTAACTCA AGACCAAAAA CCAAAAGATA ATGCCAGGAG AAAAACAGGG 180 AAGTGGCTAA ATGACAAAGT ATCTGAACTT CTGCTTAAGA CAAAGGACAC AATTACGCAA 240 AAAGCTATGC ACGGGAAGAT AACATGGCAG GAATGAAAAC AGCTATCAAT AAGGATAGTA 300 ATATTGTGGG TGATTTTTTT CTTTTTGAAA ATTTTCTTAA ATTATGTTAT TATACTGTGT 360 TTTCAGTTTT TAAAAAGGAC CGAAAAGTGG GGAGGGGCAG TACAGGAAAA CACACCGTGG 420 GAACAGAGTC AAGCACACAG ATGGTTTGCG TAAGCTAAAT TTTCAGACAT CTGCCTTTGT 480 GCAAGACTGG AAAAAGTAGA GCTGCTGTCA ACAAGTTCTC TGCAGTGAGA GAGGGGTGGA 540 GCCTGAGAGA AAGTGAACCG TGAAGAAACC AACAATCCGA AGCCACAGGG CTGAAGAACA 600 AATAATTTCT TAGATTAAGT TCCTCATTTA TGAGCTACCC CTCTTCCCAA AATGCTTTGC 660 CATCGGCAAT GTCTACTACT CAAATAAGGA GACCTTAAGC TGCCCATATG TCTCCACTTA 720 AGTGACTGAG GTTCTCTGTC AGTAGCACTA CTTAGCTCTA TGCAAGATAT CCCATCTCTG 780 TGGGCAAGAT ATCCCATCTC TGTGGGAGAT GAGATATGGT ACAATATACT GTATAAAAAT 840 CTGGGTGAGA TGCAAATGGC CCCAAACCTC CCTTCATTTT CCAATTCCAA ATAAAAAAAA 900 GCTTATCATG TACAGAAAAC TCATGTAAAA GCAAAGACAA TACAGTTGTT CATCTGCTCT 960 ACTGCCTTGC TTTGATATAT GTTTAACTTT ATTTCTGTTT AGTTAAATGA ATACTCCTAG 1020 GCCTATATTG TTTGCTCTTG CATGTAAGGC AATGAAGGGA AATTGCCATT CACACTGCTT 1080 TATATAGTGC CCAGTGTAAC GCTATATACA CAGTGCTTAA TGAATGTGAT CTGAAAATGG 1140 CAATAGGGAA GCTGAAGACT CAAGAACACT TTGGAAGATA AGAAAGTATG GAAGATATTA 1200 CAAAACCTCT TCTCTGGTAC ATGTGAAGAA CGGGAAGGTA ACATGGCAGG AATGGAAATG 1260 GCCCTAAGTA AGGAACTTAA CATTGTGGGT AATTTTTTCT CTTTTTGAAA ATTTTCTTTA 1320 ATGATATTAT TCTGTGTTTT CAATTTTTAT AAAGGACCAA AGTGATTCTG GGGTGGGGGG 1380 TAGGGCAGCT CTTCTGGCAG GTGAGAAAGC CCACATTTGT CATACAAACC ACAGGAAAGG 1440 CCTTATTTGT TCTTGTTTGC AGCCTTTAAT CAGGCCTCAT GCTAGGGGGA ACTTCTTCCA 1500 CTTGAAAAAT TTACTTGCAA AGTTCTATCT GGTGTTCTGT CTTGAACTTC CCTTTTCTGA 1560 GAAGTTGGGT GTATTGTATG GGATACTCCC ATACATCTAC CTTCTGGGCA AACTGACTAC 1620 AAAAGATGTG GGAAATCTCT TGTTCAGGCA CAGTAGCCTC TCTTAGGTCC TATATAAGCT 1680 CCTCTTCCTG AATTCTCAGT CAGTTAATTC CACATAGTTC ACAGGACCCA CATTTTCCTG 1740 TTGGTGACAG CAAAAGCTAC AACAGACCAA ATTATAATTT AATCAACTAG ATACAGATTT 1800 TAACTCAAAG GTGTAATACA TGCAAAACAG AGGAAGGTGC CTATTCTTTC TGTACTCATA 1860 TAATCTAACT GAGGTTTTAA AATGTGGATG TCAGAACCTA TTCTAGCCGG GCAGGGTGGC 1920 TCACACCTGT AATCCCAGCA CTTCGGGAGG CCGAGGTGGG TGGATGGCCT GAGGTCGGGA 1980 GTTCAAGACC AGCCTGACCA ACATGGTGAA ACCCCATCTC 2020
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