EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-12530

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr14:56022720-56024620

Target genes

Number: 2
Name	Ensembl ID

RP11	ENSG00000213641
KTN1	ENSG00000126777

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr14:56023361-56023372	AAGAGGATTAG	+	6.62
Lhx3	MA0135.1	chr14:56024495-56024508	TAATTAATTATTT	+	6.71
REST	MA0138.2	chr14:56024024-56024045	GCATTTATCCATGGTGCTTAA	-	6.06

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH14I055556

chr14

56023250

56024567

Enhancer Sequence

CTACCATTTA CTTTGATCCT TGAAAATTTC TGGAAAGCTC TAATATTGCT GAGCTTTTTA 60
ATAAACCTAT TTTGTGACGG AGTATTACTG GGATTCAGTT AGAAATTGGA CTAAAGAAAG 120
GAAATCTAAT CAGTTGATGT TGGTTTATAG GGTGAATAAG TAAGACTTCC ACATGTCAGT 180
TGTTATCTAG GCTTCAGAGC TATCATTCAT CAAATTTCTA ACACAGGTAG CCATGTTCCC 240
AAATTTGTCT TTAGTTTTCA ATTTAAGGAG AGAAAGTCTT GATGAAGATT TCTTATATTT 300
GAGCTTTTCT AAGACAGTGA AAAATTTAAA GCAGGTGTGG CAACTATGAA TGTTTTCTGC 360
GAACTTGGGA GGTACATGAA ATATTGCACC TTTTATAGGT TGAACAACAT CAATTTGATG 420
TTTTTGCATG TCAAAAATTG TCAGATATCA GCAATTTTAT ATGCTTTACC CTAGTGATTT 480
TCTCTAAATC AATTTAATTC CATTTTGAAC TTTTATCTTA CCATATTGGC ATAAAGTTAA 540
GCTTAGTCAT TTGCAAGATT TCTCCATACC TCCACCTTCT TCTGTCCCTA TTCTCCCTTC 600
AACCTCCCCC TTGCGTGGAA ATACCTCAAA GTTCCAGATA GAAGAGGATT AGGGGAAGGG 660
GCCAACATCT GCTTGAATTC ACACTGTCTC TTTCACTGAC CCCTGTCTGC CTCTGTTCTT 720
TCTGTGCTGT TCTGGGAGCA TGGGAGCCTC AAGACAGGCT GCCTAAGGAT CAGCACTGGT 780
CAGTGGTTTC TTCTCTGGGG TCTTACTGCC TCCATAATAA GTACAACCAA GAGTGCAAAA 840
GGATTTCCAG ATGACCATGC CAAAGCTTAC CGTAAAGCAA ATGGATCACT GTACATAATG 900
CCCAGAATAT CATAGGCACT CAGTAAGTAT TGATTAAAGG AATAAATAAA TGATCTGAAG 960
TGGTCAATCT AAGCACAATA AGCAGTGAGT GGAAAAATAG CAATAGCAAA CACTCATAGG 1020
GCTTTTAATG TGACAGGCAT TGTTCTACAT GCTTTACATA CATTAACTCA TGCAGTCCCC 1080
AAAATGACTC TTGGAGGTAT GAAACAGAGC AGAGCTAAAG TAACTTCTCA GGTTGCTGGA 1140
AGGCCCCTGT AGTCTGACTC AAGAGCCTGT ATTATATTTA AGCACTAGTT CATATGGCAG 1200
CTCAGACATA GACTCAAGGA TGATTTCTAA CTTCGTAGAC AAAGAGCTGG GCCTTAGATG 1260
TCCTTAGATA TTGCAAGTTG ACTTCACACA AGGTTTCACC AGCGGCATTT ATCCATGGTG 1320
CTTAAGAGCA CTAACAAATT CCAGGCAACA TCCTGGCATG CAGCCAGCCC ACTGGCATTC 1380
CTGTCTGGCA CACTTTGCAG GACTGGTCAT GTGAGAAAGA CAGCTAACAG CAACAATTGC 1440
TGGGTGATGA ATAGCCAGAA GGAGGGCAGC TTGAAGCATG ACAGGGACAA GGAATGCAAT 1500
CAGGAAAGGC TGACCTGGAA CTTGGAGCGG GGGTAAGTTA GGCTGTGATG GATGGAAGGC 1560
AGCAGCTGCA TGTACAGCAT GCTGGCAGGC ACAGTCTGAG AAACACTGCT TAATTTGAAT 1620
CGAATGGGCA GCTTAAGAGG CAGAGAGGCA AGCAGTGACC AAAGCCACAA ACCGAAACAC 1680
AAACCTTTCA TTAATCTTTC CAACCATACT CACACTCTTG GCAACACAAC TTTTCAATGA 1740
GTTGAACATA ACTCATTGTT GTTCCGCATC ATTTTTAATT AATTATTTTA TTTATTTATT 1800
TTTGAGACAG AGTCTCGCTC TGTCGCCCAG GCTAGAGTGT AGTGGCATGA TCTCGGCTCA 1860
CTGCAACCTC TGCCTCCCAG GTTCAAGCAA TTCTTCTGCC 1900