EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-12080

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr13:115047320-115047490

Target genes

Number: 6
Name	Ensembl ID

RASA3	ENSG00000232487
CDC16	ENSG00000130177
UPF3A	ENSG00000169062
CLCP2	ENSG00000226158
CHAMP1	ENSG00000198824
AL845154.2	ENSG00000229723

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr13:115047374-115047392	GGAGGGAGGGGAGGGAGG	+	6.09
EWSR1-FLI1	MA0149.1	chr13:115047383-115047401	GGAGGGAGGGGAGGGAGG	+	6.09
KLF16	MA0741.1	chr13:115047329-115047340	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr13:115047330-115047340	GGGGCGGGGC	-	6.02
ZNF263	MA0528.1	chr13:115047384-115047405	GAGGGAGGGGAGGGAGGGGCG	+	6.53
ZNF263	MA0528.1	chr13:115047371-115047392	AGTGGAGGGAGGGGAGGGAGG	+	7.34
ZNF263	MA0528.1	chr13:115047375-115047396	GAGGGAGGGGAGGGAGGGGAG	+	7.53
ZNF263	MA0528.1	chr13:115047380-115047401	AGGGGAGGGAGGGGAGGGAGG	+	7.8

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_43712	chr13:115039238-115048651	MM1S
SE_46074	chr13:115044499-115048804	Osteoblasts
SE_56520	chr13:115044936-115048964	u87
SE_67415	chr13:115039238-115048651	MM1S

Enhancer Sequence

GGTGGGGACG GGGGCGGGGC GCGCAAACCT CGCGAGGAGA GGACGGCCCT GAGTGGAGGG 60
AGGGGAGGGA GGGGAGGGAG GGGCGGGGGC CGGGCCTCCC AGCGCGGTAC GCGGTGCCTT 120
TTGAGCTCCT TGTCCACGCT CCGCCCCGGT GGGAACGGCC GCGCGCTCCC 170