EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-09431

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr12:53455250-53455590

Target genes

Number: 25
Name	Ensembl ID

RPL7P41	ENSG00000241146
KRT18	ENSG00000111057
KRT8	ENSG00000170421
AC107016.1	ENSG00000225410
EIF4B	ENSG00000063046
RP11	ENSG00000257475
TENC1	ENSG00000111077
SPRYD3	ENSG00000167778
IGFBP6	ENSG00000167779
SOAT2	ENSG00000167780
VTI1BP3	ENSG00000258074
U6	ENSG00000238669
HIGD1AP1	ENSG00000258016
ZNF740	ENSG00000139651
CSAD	ENSG00000139631
ITGB7	ENSG00000139626
RARG	ENSG00000172819
MFSD5	ENSG00000182544
ESPL1	ENSG00000135476
PFDN5	ENSG00000123349
C12orf10	ENSG00000139637
AAAS	ENSG00000094914
SP1	ENSG00000185591
PRR13	ENSG00000205352
PCBP2	ENSG00000197111

dbSUPER

Number of super-enhancer constituents: 27
ID	Coordinate	Tissue/cell

SE_00292	chr12:53452812-53461893	Adipose_Nuclei
SE_00927	chr12:53454007-53457132	Adrenal_Gland
SE_01709	chr12:53453012-53460725	Aorta
SE_03289	chr12:53454981-53455856	Brain_Angular_Gyrus
SE_04073	chr12:53454227-53455988	Brain_Anterior_Caudate
SE_05063	chr12:53452898-53456876	Brain_Cingulate_Gyrus
SE_05963	chr12:53441226-53470688	Brain_Hippocampus_Middle
SE_06898	chr12:53454449-53457101	Brain_Hippocampus_Middle_150
SE_07995	chr12:53453245-53457038	Brain_Inferior_Temporal_Lobe
SE_26816	chr12:53454326-53457169	Esophagus
SE_29628	chr12:53455554-53460734	Fetal_Muscle
SE_31505	chr12:53453385-53457435	Gastric
SE_34368	chr12:53454736-53456369	HCT-116
SE_35271	chr12:53454881-53455693	HeLa
SE_40690	chr12:53453334-53457276	Left_Ventricle
SE_41663	chr12:53454581-53456745	LNCaP
SE_42222	chr12:53452812-53460742	Lung
SE_46658	chr12:53454246-53455544	Ovary
SE_47537	chr12:53455005-53456145	Pancreas
SE_48159	chr12:53454754-53456816	Psoas_Muscle
SE_48623	chr12:53453464-53457055	Right_Atrium
SE_50234	chr12:53454923-53457051	Sigmoid_Colon
SE_51279	chr12:53453670-53460956	Skeletal_Muscle
SE_52572	chr12:53454834-53457288	Small_Intestine
SE_53495	chr12:53454058-53456925	Spleen
SE_54694	chr12:53454312-53455576	Stomach_Smooth_Muscle
SE_65375	chr12:53453857-53457380	Pancreatic_islets

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH12I053060

chr12

53453939

53467486

Enhancer Sequence

AAGGTGAGAA GCCAGCCTGC CCCCACCCCA CTGCATCCCA CCTTCCAGGG TGTCTGTCTT 60
GGCTTTAAGT CCCATCCTGT TGAAGCTCTT GGCTCCTCCT GTCTGAGCTG TGTTTACTCT 120
TGGCTGAGTG TTTACCAGCA GGTGATTCTG GGCTTTGGGC CAAGGCGGTG AGATCCAACA 180
TGGTCAAAAC CCCTGTGAAC TCTAGAGCCC TGGCCTCAGA CTCTTACCGC CACCACAGCT 240
GTCAGGGCAG AGACCATGGA GCTTGGCAGC AGAGGAGGGG GGCTGCATGG GGCTCAGTCC 300
ACCCCTGTGA AAACTCCTCC CCACTGCCCG CTACCCCTCA 340