EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-03229

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr1:201520640-201523340

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SPI1

MA0080.4

chr1:201523158-201523172

AACTTCCCCATTTC

6.13

dbSUPER

Number of super-enhancer constituents: 19
ID	Coordinate	Tissue/cell

SE_02662	chr1:201520519-201523848	Astrocytes
SE_03518	chr1:201520682-201522728	Brain_Angular_Gyrus
SE_03518	chr1:201522955-201523792	Brain_Angular_Gyrus
SE_04409	chr1:201519619-201524045	Brain_Anterior_Caudate
SE_05175	chr1:201519473-201524802	Brain_Cingulate_Gyrus
SE_06157	chr1:201519646-201524543	Brain_Hippocampus_Middle
SE_07280	chr1:201519685-201524274	Brain_Hippocampus_Middle_150
SE_08097	chr1:201519677-201524489	Brain_Inferior_Temporal_Lobe
SE_37083	chr1:201520031-201524729	HSMMtube
SE_44518	chr1:201519697-201524285	NHDF-Ad
SE_45347	chr1:201521075-201521626	NHLF
SE_45347	chr1:201522324-201522965	NHLF
SE_45633	chr1:201519539-201527734	Osteoblasts
SE_52112	chr1:201520520-201523902	Skeletal_Muscle_Myoblast
SE_56031	chr1:201519792-201523361	u87
SE_63919	chr1:201520506-201524038	HSMM
SE_65852	chr1:201520853-201522775	Pancreatic_islets
SE_67744	chr1:201519792-201523361	u87
SE_67991	chr1:201468991-201535915	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I201550

chr1

201519938

201524528

Enhancer Sequence

GCCACCTCGC CCAGCGCCAC AGTGTCTTTA ATGGCTCATA GAACTTAACC ACAGACATCA 60
TGTCTGTTAT ACAAATGCAG AAATCATATT GAGCTTTTAA ATTTACTTTG CTATCACATT 120
TATTTTGACA AGCGCTTGAG ATTTATTTCT CAATAAAAGC TACTTTAAAG TACACCACCA 180
ATTTTATCAC TTCTGCTCAT TTTTACCCAG TCAAAAAAAT AACGTAAAAG TGTTACGTTT 240
TGAGGTTCTG TTTCTCATTT TCTCATCAGA GTTGAAAATT ACCATTGTGC ATGAATTTAG 300
GCCTGTGTTA GGCTGGCAAC CCATTAAAAC TCCTCTGCTT TTTAGCCGGT CTGGAGCTAA 360
TAAGCCGGCC CCTCCCAATT TACACATCTC CTGTGAGATC CAGTGTCTCT CTGTCACTCA 420
TTACCAAGCT CCTTACTAAA TGTCATCACA AAGATGCCAC ATCACCCCTC TTAGTCATCT 480
CCCCACTTCC TCTTGCTGGC CATGGCCAGA AAGAAATCAG GGGCCGTAGG GAGGCCTAGA 540
AAGTGACCAC AGAGTTGGGG GTGGCTGTGG GAAGTGGATG GGAATGGCCA CTGCTGAGCT 600
GGCCACAGAG ACTGTGACAA AGACAAAGGC CTCTGTGTTT GGGATGGCAG GGAGGGGGCC 660
AGAGGCCGAG TCAGGGCTGG CATGCTGATA GTCTGGGAAA GGCCTCCCAG GGCAGAGGAA 720
AGCCCACAAT GCCACTCTGA GTTGGCCGCT CTTAGCACTT GGAAGTAGCT TAGTTGGGTC 780
CTGATACACA GTAGGGGCTC AGCAAACATT TGTTGATTGA TTATTTGGCA GGGTGGCGGG 840
GTTGGGGGTA AGGGATGCCT TTAAGCTGAG GTGGGTAAAG GGAATGTCCT TTCCCTTTCT 900
CCTGCCCACG GGAGCGCTGA AGGTGCTGAA TTTCCCTGGC TTGTTCAGAG GCCACCTCTT 960
TGCTTCCTTG ACCTCTCCCT GACATTGGGC TCTGACGCAT GTGGGGTAAT GCACAGGCTT 1020
TGGAGTCAGC CTGACCCGGG TTCCTACAAC CTCCCTGAGC CTCAATTTTC TCGTCTGTAA 1080
AATGGGGGCA ATAATACTCA GGCCAGGGAA TTGTGAAGAT CATCCTAGAA GGTGTTAAGC 1140
ACCCTCTGGC CTAGAGCCAA TGTTGGTCAT TCTTATGGTC CTTAATTTGG ATGCCCCGTG 1200
GCTCGCTGCA CCCCCATGTA TAAAATAAAT CCTTGATCCA CCGAACGTAC ACCGGACAGG 1260
CAAAGGGATG GAGCGAAGTC AAGGATGCCT CATTTAGCCC CAGCCATGCA GACTATACTT 1320
CGGGGTAGAT TTATCCCCAA ATGGATGTTT ACGTATCAGA CAGGGGATGC TTCCCTGTCT 1380
GAGGGTCAGA TGGACGGGTG GAAGGGTTAT CTGTGGTGCT GGCTCTAAGA TATATGGTCC 1440
CTCAGGCCCC TCTGGGCTCC AGACTGCAGG CCTCCAGGGG ACGAGGGGGG CAGAGTGGCC 1500
TGGGGTTTTG TTTGGCAACA CTGGCCTATT ATCTGGCCCA GGCTGTGTTT CCAGGGCATT 1560
GTAAATAGCA CCCGCTTGGC TCTGGAAGGA GGAGCCGCAG ATGTGGCTGA GGCAAAATAT 1620
ATGGTAAGGT GGGAGATTTG AAATGATAAA CTCGAGGCTT GTGAGCCAAA ATACAGGCTG 1680
GGGCCATCTC CAGGCAATAG GACACCAGGG AGGGCTCAGC CTGGATACCT CTGTGGTGAA 1740
GGCCTGACTC ACAAAGCCAG ACAGAGCCTG TGCTCAGTGG CCCATGGGCC AGGGCTGCCG 1800
GCTCTGTTTG CTTCCATCTG CCTCTTTGTA GAGAGCCTGG GCTGCTTCCT AAACTCAGCC 1860
AGAGGAGTGA ACAGAGCTTG AGCCAGATTT CAGGTCTAGA GAGAGAAGCA GGAGAAAATG 1920
TGAGGGTATA TTCACCTGCA AAAGGCCAGC CACTGTGTGT TCCAACCGAG AAGGAGGGAA 1980
TCCTTTTCTC TTCTTTTATT CTATTGTCTT CTATTTTAAT TGAGGTATAA TTTACAAACA 2040
GTGAAACACA CAGATCGATG TGTTTTTGAC AAATGAATAC GCCCATGTGA CCCACACCGG 2100
ATCCAGATAT GGAACATTTC CATCAACCCA CAGAATTTCC CTCCTGTCCC TTTTGTCAAT 2160
GTGCTCCCAC CCACTGTCTC CGTGTTCTGA TTCGTATCAT CATAGATTAG TTTTGCCTGC 2220
TCTTGAACTT CATATAAATG GAATCATGTG GTAGGTTCTA TTTTGTGTCT GGCTTCTTAG 2280
CTCAGCATAA TGTTTTTGAG ATTCATCCAT GTTGAATGAT GTATTTTGCT TCTTTTAATT 2340
TCTGACGTAT GAATGTGCCA CAGTTTGTTT ATGGGAGGAA ACTTGAGATT CCTTTCATTG 2400
CGGTAGGATT CACATCTATC CAGCATCAAT AGAGTATCTG CCAGGGTTTT GAGAGTTAAG 2460
CTGGTCGGTC CTTAGTGGAT GTTTAAAGTG TTCAGTGTCA CCTTCTTTGT TCCCAGACAA 2520
CTTCCCCATT TCTGTGTCTT GCTGTAAAAG ACCATAATGC CTTTTCTTCC CTCCATGGAC 2580
TGGAGCTGCC TTTATCTCCT GGAGCTGGGA AGTTCAGATC ATTTGTAGAG GGGCCCCTGG 2640
TTTCCCCATA AGACAGAATG TTATTCTTTA ATCTGAATTG AGCTGACACG TGTTGACAGA 2700