EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-02340

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr1:148948150-148950440

Target genes

Number: 4
Name	Ensembl ID

NBPF15	ENSG00000243452
PFN1P6	ENSG00000237533
NBPF16	ENSG00000203827
RP11	ENSG00000235887

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxq1	MA0040.1	chr1:148948334-148948345	AATAAACAATG	-	6.02
ONECUT2	MA0756.1	chr1:148948247-148948261	TAAAAATCAATAAG	+	6.03
ONECUT3	MA0757.1	chr1:148948247-148948261	TAAAAATCAATAAG	+	6.51
ZNF263	MA0528.1	chr1:148948171-148948192	AGAGGAGAGAGAGAGAGAGAG	+	6.22
ZNF263	MA0528.1	chr1:148948168-148948189	GGAAGAGGAGAGAGAGAGAGA	+	6.28
ZNF263	MA0528.1	chr1:148948160-148948181	GGAGGAGAGGAAGAGGAGAGA	+	6.49
ZNF263	MA0528.1	chr1:148948165-148948186	AGAGGAAGAGGAGAGAGAGAG	+	6.59
ZNF263	MA0528.1	chr1:148949591-148949612	GGAGCAGGGTAGAGGGGAGGG	+	6.79
ZNF263	MA0528.1	chr1:148948157-148948178	GAAGGAGGAGAGGAAGAGGAG	+	7.34

Enhancer Sequence

AAAATGAGAA GGAGGAGAGG AAGAGGAGAG AGAGAGAGAG AGAGAAAATA ACTTACTTGA 60
ACCTCCAAAT TCAGGCATAC CATGGTCTTT GCAGTTATAA AAATCAATAA GTCACCCTTC 120
AGCTGAAACA TGTCTAAGTG GAGTTTCAGT TGTTACAACT GACAGAGCCC TGCCTAGCAC 180
AAGGAATAAA CAATGTTCAG CAGTGGCATG AGAACAAGGG ACAGCCTGTT TGGTGGGCAG 240
CATGGCAAAT GACTGTCTGG AAAATATGAT GCTTGGGCTG GAGGGCAAAG TGGAATTCAC 300
CAGCATGCAG GGTGGAAGTA CGACCCTAGC AGACGGAACA GCACTGGCAA AGGCTCAGAG 360
GCAAGAAGCT TTACATGTGA AAGGATACAT TTTTAGAACA CTAAACATTC TCCCTGTTAT 420
CCAAAACACT GAGTTTCTCT TCATTTTTTG GCCAGGTGTG GTGGCTCACG CCTTTAATCC 480
CAGCACTTTC GGGGCTGAGG TGGGTAGATC ACCTGAGGTC AGGAGCTCAA ACCAGCCTGA 540
CCAACATGGC AAAACCCCAT CTCTACTAAA AATACAAAAA TTAGCTGGGT GAGGTGGCAG 600
ACACCTGTAA TCCCAGCTAC TCGGGAGGCT GAGGGAGAAG AATAACTTGA ACCAGGAGTC 660
AGAGGTTACA GTGAGCTGAG ATCGTGCCAC TGCACTCCAG CCTGGGAGAT GAGACAGAGC 720
AAGACTATCT AAAAAAAAAA AAAGACTGAG TTTCTCATCA TTTTTTGAAA TTGAGAGTTT 780
TCTCTGTATC GATAAGACCT TATAATGCAA AATATAATAT AATATGCAGC TAGGTCTCCA 840
CAGCCTTCAG TCTTTCCCAG GGAGGGTTCC ATGAGCTGCT TGTCTGGTGG GGATGGTGGT 900
TTTGAGCAAG TAGTTGGTGT CCTGTCTTAC CCAGGCTCTT TCCCACAAAG AGTTGGGAAG 960
AATTAAAAAC TACTGGAAAC CAAGATCTCT CCCTGATGTT GACTTTCAGA GCTCAGCCTC 1020
ATCAGCACAG GCTCTAATCA GCTAAGCAGC TGCCTCGTTT CATCCAGCCA GAGCCCTGAT 1080
CTCAGGGGAT GATAGTGAGG AAATGATCCT TTCACATGCC TGGCTCCTGC AAAATTGTGC 1140
TAAGAGGATT TTCCTCAAAC AGTTTAGCAC AGAGCGAGGT TTCCTGATCC AGTTAGCAAA 1200
TATTCTTCTG TTTGAACTCA CTGACCCTCC TTTTTCTGAA GATGTATTTT AAATTGGATT 1260
TGCTTCACTG ACACAAATGG AAAACTTGAT AAGAAAATCG GTGGGATTTT GCTGCACCCA 1320
CTGCTGATAT CAAGACTGAA CTCTGTATTA TAGCAAGAAA AGCTCTGTTC TGTGGCTACA 1380
GGATACATGC TGAGCTCCCA GCCACCAGCC CTGCCAATGT GCTCAGCTTG GCACAGGGCA 1440
GGGAGCAGGG TAGAGGGGAG GGGATGGGGA GGGGCAGGTG GAAAGGCTCA GGTGATGAGC 1500
CAGCCACATC ACCTCAAGCA CAGGACCCCT GATGGTGGCC CTAGATCCTC CTCTTGAAAT 1560
CCAAAGCTCA GTCCCTCTCC CCAGTTCAGG AGCAAGGAGG TTTCTGGCAG GTTAAAATGG 1620
CTAACTCAAG AGCTTGCCAC CTTTGAAAGG CAGCACTGTG TAGACAGAGG CAGAAGGATG 1680
GGCTTACGAG ACAGTCCTGG CTTCAAATCC TTCTCTGACT TACCAGCTCT GGAACCTTAA 1740
GCAAGTGACG TAACCTCTCT AAGCCTCAGT TGCCTCATCT TTAAAATGGC ATCCCTAATC 1800
CTTACTATGA AGAGATATCA TGGGTAAATG AGATGCTGTA CTTACGAAAG GGCAAGTCCC 1860
TGTATTGGTC AAGTGTTTTT ACAGCATTGC TGCATAACAC ACAGCCCCAG GGGCTCAGCA 1920
GCTCAAAACA AGTGTTTATT TCTTGCTAAT AATTTGCAGT GAGCTGGGAA GCCTTGCCTC 1980
GGACTGGGGG CCAGGCTCTG TTTGCTTCTG TGTGTCTCAT TCACAGGCCA GTGGTTCCCC 2040
GGAGCTTGCT CTTCTCATTG TGCAGGGGTA GGGTCAGTGC TGCCACCCAA CACCACATTC 2100
AGTTAGAGCC TCCAGTCAGA CCAGGCATGC ACTAACTCTG CTCATGCATC TCTAGCCAAA 2160
GCTGGTCATG TGCACAGCAA GAAATCTGCT CTGTCCTGTC CACAGGGAAG TCGCAGGAAT 2220
GTGGAAAGGC CAGGAAGGAT TGTGAGCCAA TAATACATCT TGACAATCCA CAATAGATGG 2280
AAGCTATTAT 2290