EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-02001

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr1:113117680-113119570

Target genes

Number: 11
Name	Ensembl ID

CTTNBP2NL	ENSG00000143079
RP4	ENSG00000249913
CAPZA1	ENSG00000116489
ST7L	ENSG00000007341
snoU13	ENSG00000238975
RHOC	ENSG00000155366
PPM1J	ENSG00000155367
RP11	ENSG00000261595
FAM19A3	ENSG00000184599
RP3	ENSG00000224167
SLC16A1	ENSG00000155380

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxq1	MA0040.1	chr1:113118314-113118325	AATTGTTTATT	+	6.02
HSF1	MA0486.2	chr1:113118324-113118337	TTCTGGAATTTTC	+	6.17
JUN(var.2)	MA0489.1	chr1:113118224-113118238	AGGGGATGAGTCAT	+	6.91
RELA	MA0107.1	chr1:113119150-113119160	GGGAATTTCC	+	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I112575

chr1

113117644

113118760

Enhancer Sequence

AAACCTCGTC TCTACTAAAA ATACAAAATA ATTAGCTGGG CGTGGTGGCG CGCACCTGTA 60
GTCCCAGCTA CTTGGGAGGC TGAGGCAGAA GAATCGCTTG AACTCTGGAG GCGGAGGTTG 120
CAGTGAGCCA AGATTCTGCC ACTGTACTCC AGCTTGGGCG AAAGCAAAAC TCTGTCTAAA 180
GAAAAATAAA AGTTTACAGT ACTCACTCCT TATCCTCAGT ACATATGTTT TAAGACTCCC 240
AGTGGATATC TGAAACCACA AATAGTACCA AACCCTACGT ACACCATGTT TTTTCCTCTA 300
AATATATGCC CATGATAGAA TTTAATTTAT AATTTAGGCA CAGTAAGAGA CTAATAACAA 360
TAACTAATGA TAAAATAGAA CAGTTATAAC AATATGTCAA TCTTGCATTT GGGGTCACTA 420
TTAAGTAAGA TAAAGGTTAC CTGAACACAA GCACTATGAT ACCATGACAG TCGATCTGAT 480
AACCGAGTTG GCTACTAAGT GACTAATGGG CGGGTAGCAT AGACAGTGTT GGATATGCTG 540
GACAAGGGGA TGAGTCATGT ACTAGCCTGG ATGGAGGGGG ATGGTGTAAG ATTTCATCAA 600
GCTACTCAGA ACGGCATGCA ACTTAAAACT TATGAATTGT TTATTTCTGG AATTTTCCAT 660
GTAATATTTT CAGACAGAGG CTGACTGTGG TAACTGAAAC CATGGAATGC AAAACCATAG 720
ATATGGGTGA ACCGCTGTCT TTAAATTTAT GGAACCAGTG TCACTTAATG AGAGAATGGT 780
ATAAATATTT GTTGACTCTC TTTCTTGGAT TTAAGTACTT TTCTTAACCA TATCTTTACT 840
TACTCTAACA GGCTTACAAC ATCCTTTTCT TGGAAATTAT CTTTTAGCAA TTAATCTCTT 900
TACTGTAGCT CTTTAGCTTC CAAGCTCTAT TAACACCCTT TCACTGGAAT CAATAGCTAT 960
AATTACTTTC CGTAGTAAGG GCATCTATTC TTGAATTGTC TATACTTCCT AACATGGGGC 1020
ATTGTTTGTA GAACCCCAAT TTTTTTTTTG AGATGGGGTT TCACTCTGTC ACCCAAGGCT 1080
TCAGTGCAGT GGCGTGATTG CAGCTCACTA CAGTCTCGAC CTCCTGGACT CAAGCAATCT 1140
TCTCCCCTTG GTCTCCCAAG TAGCTGAGAC AACAGGAAGC ATCACCACAC TCAGATAATT 1200
TTTATATTTT TTGCAGAGAT GAGGTCTCAC CACATTGCCC AGCCGCTAGT CCCAAACTCC 1260
TGGGCTCAAG TAATCCTCCC ACCTCGGCCT CCCAAAGTGT TGAGATTATA GGCATGAGCC 1320
ACTGTGCCCA GCCCAAACCC CAAAATTTAA TTTTGTGTTG TAACACACAA AGATTAAGCA 1380
ATAATTTGTA TAACTGCAAG GTGTACAATA TAAAGACAAA GCAAGTATAT AGACTCATTG 1440
GGGACGAAAT AAGCATCAGC CAGTTTTTCT GGGAATTTCC ACATCTGCCT CCTATCATTG 1500
ATTATTTTAA TCTGTTTGTC TTCAGTTTTT GTCTACCCAA CCCTAGTTCA AAACCCAGGC 1560
ATCTGTCTAG AAAAAGCTTT CACAGTAACA GGAAATTTGA TTTAGTGATA AGAAATATGA 1620
ATAATCTTTT ATTAAGACCA ACCCATTATT TATTTTCTAC AACTATACTA AAAGAACAGC 1680
TAAGTGAACA CAGTTCAAAT TATATTTTGA TAGTAATTAC AAAGCATATA GCTAACTATT 1740
GCTCCTATCT ACCTTTCTAA ATGCCTAAAT GTTTCAACGT CCCCTGTAAG GTGAATAATA 1800
AGCATCAAAA TATAGCAGAT TAAAACAATT CTGCACCAAA TTATGGTGAC CCAGACTCTG 1860
GTCTACGAAC TGTCATCAAT TTGATAAACT 1890