| Tag | Content |
|---|
EnhancerAtlas ID | HS176-01946 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:109841040-109842500 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| FOXC1 | MA0032.2 | chr1:109842034-109842045 | ATGTTTACTTA | - | 6.02 | | HLF | MA0043.2 | chr1:109842068-109842080 | CATTACATAACA | + | 6.32 | | TCF7L2 | MA0523.1 | chr1:109841544-109841558 | TCCCTTTGATCTCA | - | 6.32 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_04926 | chr1:109837258-109868226 | Brain_Cingulate_Gyrus | | SE_05980 | chr1:109837240-109858956 | Brain_Hippocampus_Middle | | SE_06825 | chr1:109837828-109864981 | Brain_Hippocampus_Middle_150 | | SE_07851 | chr1:109837232-109868199 | Brain_Inferior_Temporal_Lobe | | SE_08842 | chr1:109841246-109841492 | Brain_Mid_Frontal_Lobe | | SE_08842 | chr1:109841537-109842170 | Brain_Mid_Frontal_Lobe | | SE_49304 | chr1:109840012-109844195 | Right_Atrium |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 109841150 | 109842200 | | chr1 | 109841804 | 109842152 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I109296 | chr1 | 109839453 | 109843868 |
|
Enhancer Sequence | GGATGAGGGG TTGGCTTAAG GAACACCCCG GGAAACATTA AAGTCTCAGC AGAAGGAACA 60
CTGGAGTGCG AGTCTGACAG TTCTCTTAAT TTGTAACTCT CAAGTACTGA CTTTCCATCA 120
TCTGGAGGCA TTCCATCCTG ATGGAGGCAT TTTTATTTTT CTGTTTGTGT ACAGACCAGC 180
CTGGTCTGTG TGGTTTGTCT TTCCACCCTT TTCTACATTT GTCCTTAATA CCATTCCTTT 240
TATCAAGGCC ACTTTCCATG TCAATCCTGA CCTCCCAGTT AGGTGTGGGT CTCAGGAGAA 300
TGCTCTCCAT TCTGCAGGCA GAGTCAACAC CCTGACCTCC CAGCCGCCCA CGGAGACAAC 360
ACTGATGTCA CTGCAGACAG AGCACGTGTC TGGGTCCCTT CCTCTGCATG GCCACTCTGC 420
TCCCGGGCGC CTGCACAGTC TTCTTCCAGT TTGCAGAGGA TCATTTTGTA CAGATTCTGG 480
GACAGATTAG GTCCACCACT CATTTCCCTT TGATCTCACA GGTCTGTCCC AGTGAGAAGT 540
AGAGATTAGA TGATGTGTAT GGGCTTCCAG GATGAAGACA GGAAATGCTT GGAAAAGTGC 600
TGAGTGTAGG TTTGGAGATT GACCAGGTAT CATTTCTCTC CTCTTGGGAT GCCTCACACT 660
GTCTCAGCTG CCGAAGCACA AACATTCCAC CTGCGTTCCC TCGGGGGCCT GGCTGAGACA 720
GACACCATTT TCTGGCCTTT TCCTGGCTGC TGTCTCCTCC TTTCTCAGGC ACAGGCAGTC 780
GCCTGGCTGA TATTATCTTC AGTAGAATGT GATAGTGCTT CAGTTCCCAA CAACCCAGGA 840
TTCTTGCCAC AGTTCATTCT TGGCAGTTGG AAGAACTTCA CCCCTGGTAC ATTCCTGTGG 900
CAAACAGCAT GACTGCTCGA TAGTGGATTC CAGACTCTTT GATAGCACAC ACTTCTGTGA 960
AAATACTTCC CTGAGCATTC ACTATGACAT ATGTATGTTT ACTTATAGAT GAACTGTTTA 1020
AATACATACA TTACATAACA CAAACATGTA AGTGACGCAA CTGAAACAGA GCTTCTTCTG 1080
TGTCCTTCCT CCAGCTCAAT CAGCAAGCAT TGTCCAGAGA ACTTCACTCT GAGTCTCCCC 1140
ATGATAATCT CAAGGTCGCG AGACCTTTGC AAATGAAGAT CAATGGCAAT GTACAGTGCA 1200
CACGGTCCGT TTGGTTTCTG CAGTTTCCTT CTGTGCTGTG TGGCTTATGT TTTCACCTGG 1260
GCTGTGCCTG TCTTAGACTG CACCTCAGGA ATATGTGACG AGGGGACTTG ATGGGCCTGA 1320
GTGCCCGTCC TCCCTGCCCT GCTCAGGTCT TGACTGCCTC AGCATAGATG CAGCAGCTGC 1380
AGGCGGCTGA GTGACCCTGC TGTGGCTGCC CTCGGCTGGG CTCTGGTGGC TTGGGAGGGG 1440
CGGGACATGA AGAACAGAAG 1460
|
