| Tag | Content |
|---|
EnhancerAtlas ID | HS176-00668 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:39624820-39625550 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nkx3-2 | MA0122.3 | chr1:39625399-39625412 | AATAAGTGGTTTT | - | 6.14 | | ZNF263 | MA0528.1 | chr1:39625134-39625155 | TGGGGAGGAGGGTGGAGGGAG | + | 6.03 | | ZNF263 | MA0528.1 | chr1:39625137-39625158 | GGAGGAGGGTGGAGGGAGGAA | + | 7.19 |
|
| | Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
| SE_02052 | chr1:39623700-39625273 | Aorta | | SE_06399 | chr1:39623194-39625443 | Brain_Hippocampus_Middle | | SE_08441 | chr1:39623554-39625364 | Brain_Inferior_Temporal_Lobe | | SE_14598 | chr1:39623413-39625353 | CD4_Memory_Primary_7pool | | SE_25799 | chr1:39623252-39625649 | Duodenum_Smooth_Muscle | | SE_30410 | chr1:39623509-39626362 | Fetal_Muscle | | SE_32006 | chr1:39623632-39626196 | Gastric | | SE_35822 | chr1:39623459-39627010 | HMEC | | SE_36947 | chr1:39622990-39632657 | HSMMtube | | SE_37973 | chr1:39623508-39626483 | HUVEC | | SE_42256 | chr1:39623665-39625283 | Lung | | SE_42256 | chr1:39625384-39626180 | Lung | | SE_45768 | chr1:39623568-39627263 | Osteoblasts | | SE_47164 | chr1:39622875-39627546 | Panc1 | | SE_51765 | chr1:39623560-39625373 | Skeletal_Muscle_Myoblast | | SE_53123 | chr1:39623552-39625824 | Small_Intestine | | SE_54583 | chr1:39623552-39625585 | Stomach_Smooth_Muscle | | SE_63563 | chr1:39623442-39625404 | HSMM | | SE_64261 | chr1:39623623-39625416 | NHEK |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I039157 | chr1 | 39622978 | 39627255 |
|
Enhancer Sequence | GCAATTAAAC AGAAGGGATA GAGTTTGTAA ATGCAATCCT AAGTGAGTAG GAGAGAATCT 60
CCTTAGGTAC TTCAGCAACA GCCTGTTGTC TTGCTTGAAC GGACAAGTAA GAAATGTCCC 120
CTGTATTCTT GAGCTCAGAG GGCTCAGGGC ACTCCCTGTT TTCTTTGAGG TGGCCAGACA 180
GTGTGGGTGG AGGGCTCTTG CCATAGGGCC CTGCAGCCTC ACCTAGGTGT AGTTATGTTT 240
CTTGGGCCAG GTTTTCCAGT TGCTTGTGTC TACAGTGAGT CAGAGTCCCA TTTGGAGAGA 300
ACTGGAGTTG GGAGTGGGGA GGAGGGTGGA GGGAGGAATG CAGGTTGATG GGCTATTTGT 360
AAGCCCATTG TAAAGTAAGC CTTTGTAAAG AGTAAAACAA TGACTTTGAA AGAGGAAGCT 420
TTTTATTAAA GTTTTAAAGG AAATAGTGTT TTCTTTGCAT CATGGGCAAA TTCTTCACTG 480
ACCAGACATG AGAAGAATGT ACTCAGATGT GATGTAGGAC TCTTTTTGGA TATTAAAGAG 540
AAAAATGAAT GAAATCTTTT TACTTTCCCT TCTCTAATTA ATAAGTGGTT TTATTTCCAT 600
TTGCAGAGGA GGGTGCTTAA ACCATTTTTC TTTCATCAGT AGTTAGGATT CTGGACCCAG 660
AGCAACCATG GGGTGTGGAG AGAGTGGGAG GGGGTAGAGG GAGGAAAGGA GTAAACTGGG 720
TTTTTTCAGG 730
|
