| Tag | Content |
|---|
EnhancerAtlas ID | HS176-00505 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:28837400-28839740 |
Target genes | | Number: 22 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NFAT5 | MA0606.1 | chr1:28838876-28838886 | ATTTTCCATT | + | 6.02 | | NFATC1 | MA0624.1 | chr1:28838876-28838886 | ATTTTCCATT | + | 6.02 | | NFATC3 | MA0625.1 | chr1:28838876-28838886 | ATTTTCCATT | + | 6.02 | | ONECUT3 | MA0757.1 | chr1:28839008-28839022 | TTTATTGATTTGTT | - | 6.12 | | Zfx | MA0146.2 | chr1:28839528-28839542 | CCCGCCTCGGCCTC | + | 6.01 |
|
| | Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
| SE_13857 | chr1:28831352-28838041 | CD34_Primary_RO01536 | | SE_15100 | chr1:28831392-28838103 | CD4_Memory_Primary_7pool | | SE_15100 | chr1:28838463-28839315 | CD4_Memory_Primary_7pool | | SE_21360 | chr1:28831370-28837817 | CD8_Memory_7pool | | SE_34487 | chr1:28831462-28837999 | HCT-116 | | SE_34487 | chr1:28838278-28839281 | HCT-116 | | SE_35630 | chr1:28831533-28837920 | HepG2 | | SE_39972 | chr1:28831732-28838143 | K562 | | SE_39972 | chr1:28838460-28839139 | K562 | | SE_65238 | chr1:28831521-28838064 | NHEK | | SE_68319 | chr1:28831355-28846288 | TC32 | | SE_68320 | chr1:28831355-28846288 | TC32 | | SE_68321 | chr1:28831355-28846288 | TC32 | | SE_68525 | chr1:28831484-28846339 | TC71 | | SE_68526 | chr1:28831484-28846339 | TC71 | | SE_68527 | chr1:28831484-28846339 | TC71 | | SE_69103 | chr1:28831754-28837755 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr1 | 28839408 | 28839498 | | chr1 | 28838068 | 28838382 | | chr1 | 28838426 | 28838985 |
|
| | Number: 3 | ID | Chromosome | Start | End |
| GH01I028512 | chr1 | 28838101 | 28838290 | | GH01I028511 | chr1 | 28838361 | 28839361 | | GH01I028513 | chr1 | 28839585 | 28840471 |
|
Enhancer Sequence | TGAACCAGTG GTTTTAGTAT GTTTTCAATC CATATACTCA GGTGGGTTTG GGTAACTGCA 60
GTGCTGGGCA GGAAATGAAT GAATTTCTAT TGACTTGCAA GGTAGAGGTG AAGCAAAGCT 120
GTCAGTAGGT GTTCAGGTCC CACTCTGCTA AACTTCAGCT TGCAATACCC CTTTTTTAGA 180
CTTTCCAAAC AGGCACTTCT GGCCTTGTTC TTTGTGTAGG CAGACAGTAT TGGTTGCCTA 240
TCTTAGGAGT ACTAGACTGG GTTTGAATCC TGATCCCACC ACTTGCTGTT CATGAGACTT 300
TGGGTGAGTT ACTCAGCCCC TCTGCCTCAA TTTCATGTTC ACAAAATAAG TGATAAACTA 360
CCTCATAGAG TTGTAATAAG GACAAAGGAG TTGGTATTTG TGAAAAGATT CTTAGGGTCT 420
CTAGATGGAG TGCAGCAGCA TGATCACTTA TTAAATAACA TTCTTTTGTG ACTTCTCAGA 480
AACCAAGGAT ACAGTATCCA ATTTTTTGTT TTTTGTTTTT TTTTTTTTTT GAGAGGGAGT 540
CTCGCTCTGT CGCCCAGGCT GGAGTGCAGT GGCACAATCT CAGCTCACTG CAAGCTCAGC 600
CTCCCCAGCA GCTGGGACTA CAGGTGCACG CCGCCACACC CGGCTAATTT TTTTGTATTT 660
TTAGTAGAGA AGGGGTTTCA CCATGTTAGC CAGGAAGGTC TCCATCTCCT GACCTCGTGA 720
TCCGCCCACC TCGGCCTCCC AAAGTGCTGG GTTTACAGGC GTCAGCCACC ATGCCCAGCT 780
TTTTTTTTTT TGAGATCTAA TCTCACTCTG TCTCCAGGAG GGAGTGCAAT GGAGCCATCT 840
TGGCTTGCTG CAACCTCCAC CTCCCGGGTT CCAGCAATTC TCCCACCTCA GCCTCCCAAG 900
TAGCTGGGAT TACAGGCGCA CGCCACCATG CCCGGCTAAT TTTTTTTGCA TTTTTTAGTA 960
GAGACGGGTT TCACCATGTT AGCCAGGCTG GTCTCGAACT CCTGACCTCA AGTGATCCAC 1020
CTGCCTCAGC ATCCCAAAGT GTTGGGATTA CAGGCGTAAG CCACTGCGCC TAGCCTCAAG 1080
CCTGATCCTT TTTTTTTTTT TTTTTTTTGA GATGGAGTCT TTGCCTCCCA GGCTGGAGTG 1140
CAGTGGCGTG ATCTCAGCTC ACTGCTACCT CTGCTTCCTG GGTTCAAGCG ATTCTCCTGC 1200
CTCAACCTCC CAAGTAGCTG GGATTACAAG CGCCTGCACC GCACCCGGCT AATTTTTGTG 1260
TTTTTTTTTT CAGTAGAGAC AGGGTTTCGC CATGTTGGCC AGGCTGGTCT CAAAACTCCT 1320
GACCTCAGGT GATCCACCAC GCCCGGCAGA GCCTTGATCT CTTAACCACT ATCCTCACCT 1380
CCCCTTTCCC TAAGGATCCA CAATGGCCTC ACTGGCTCTT GAAGGCAGGC TGGCACCTTG 1440
ATCATTCTTC CTGGTCATTA GTATTCTGAT CTGGTTATTT TCCATTTTAT GTCCATCTAA 1500
CCTACTTGGA GGATCCTCAA GAGACTGCAT ATGTAAACTC AGTACTTATT CTTGTACTGT 1560
GCCTGCCATA TAGCAAGCAC TGGCTGATTT AATTTTTCTG TGTTCTTTTT TATTGATTTG 1620
TTTTTATCTT TATTATTTTC TTTGCTTATT TTGGGGTTAG TTTGCTCATC TATTCCTAGT 1680
TTCTTAAGCT AGTAGCTGAG CTCATTGATT GGAGACCTTT CTTTTTTTCT AATGTAGGCA 1740
TTTAGTGCTA TAAATTTCCT CCAGATACTG TTAACAACAC ACAAATTCTG GTATGTTTTG 1800
TTTTCATTTT AATTCATTTC AAAATATTTT TGAGTTCCTT TTCTATTCTT TGATCTATGG 1860
GCTACTTGAA AGTGTATTAT TGTTGTTGTA TTAGTGTTGT TCAAATCTAT CCTTGCTAGT 1920
TTCTTTTTTT TTGGAGACTG CGTCTCCAAA GGCTGGAGTG CAGTGGCACA ATCTTGGCTC 1980
ACTGCAAGCT CCGCCTCCTG GGTTCACACC ATTCTCCTGC CTCAGCGTCC CCAGCAGCTG 2040
GGACTACAGG TGCCTGCCAC CATGCCCTGC TAATTTTTTG TAGAGATGGG GTTTCACCAT 2100
GGTCTCAATC TCCTGACCTT GTGATCCACC CGCCTCGGCC TCCCAAAGTG CTGGGATTAC 2160
AGGTGTGAGC CACCGCGCCC AGCCTCTTTT TTTTTTTTAG ACAAGAGTCT CACTCTGTTG 2220
CCAAAGCCAG AGTGCAGTGG CACAATCTCA GCTCACTGCA ACTTCTGCCT CCGGAGTAGC 2280
TGGAATTACA GTCACGCACC ACCACGCCCA GCTAATTTTT TTGTATTTTT AGTAGAGATG 2340
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