EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-00465

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr1:27215620-27216170

Target genes

Number: 16
Name	Ensembl ID

RP4	ENSG00000235069
RP5	ENSG00000260063
ARID1A	ENSG00000117713
PIGV	ENSG00000060642
ZDHHC18	ENSG00000204160
SFN	ENSG00000175793
RP1	ENSG00000226698
GPN2	ENSG00000142751
NUDC	ENSG00000090273
GPATCH3	ENSG00000198746
NR0B2	ENSG00000131910
C1orf172	ENSG00000175707
RP11	ENSG00000172746
OSTCP2	ENSG00000225294
TRNP1	ENSG00000253368
FAM46B	ENSG00000158246

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr1:27216101-27216115	ATGGGGGCGTGGCG	-	6
KLF16	MA0741.1	chr1:27216103-27216114	GGGGGCGTGGC	-	6.62
SP1	MA0079.4	chr1:27216102-27216117	TGGGGGCGTGGCGTC	-	6.04
SP3	MA0746.2	chr1:27216102-27216115	TGGGGGCGTGGCG	-	6.57
SP4	MA0685.1	chr1:27216100-27216117	CATGGGGGCGTGGCGTC	-	6.13
SP8	MA0747.1	chr1:27216102-27216114	TGGGGGCGTGGC	-	6.11

Enhancer Sequence

GAGGGAATAG ACAGGGTGAG AGTGGCCTGG AGAAACAGGG ATCAGCATTC CCTCATGAGA 60
ATGAGGGCTT GAGGACAGAG GGGAAGCTTT CCCCATTAGT CTCCTGCCTC TGTTTCTTTC 120
TAATAACCAC CCTGGTTTCC TTCTCCCAGG AAATAGGAGT CATCTTTTTT TTCTTACAAG 180
AGGTCTTGCA CTGAGCCTCC CAGTGGGCAA GGGGTTTAAA TCCCATGGCA TCTGACTCCA 240
CTCTTTCATT TACTTTTGCC CACCAATTTA CAACAATCTC CATGCCACTT TCGACATTAA 300
CCCCTTCCAT ACTTCCAAAA TCGCCAAGTT GGCTACTAAC ACATTTTACA CGTGAGGAAA 360
CTGAGGTTCA GAGTGATGAA CTGACTTATC AACACCACAC AGCCAGTCAG TAGCAGAGCC 420
AGATTCTGAA CTCATGCCTG TTTTACTCCA AAGCGACCCA GCCCCTACCT CCCTGTGTGA 480
CATGGGGGCG TGGCGTCTGT CCTCCCTGTC TCAGTTACTC CATCCGCAAA ATGGGCCTCC 540
CCGCCCTGAG 550