EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS176-00391

Organism

Homo sapiens

Tissue/cell

SK-N-SH

Coordinate

chr1:24125500-24125850

Target genes

Number: 19
Name	Ensembl ID

RP4	ENSG00000232482
TCEA3	ENSG00000204219
ASAP3	ENSG00000088280
E2F2	ENSG00000007968
RP1	ENSG00000235052
ID3	ENSG00000117318
MDS2	ENSG00000197880
RPL11	ENSG00000142676
AL031295.1	ENSG00000244609
TCEB3	ENSG00000011007
RP5	ENSG00000236810
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
FUCA1	ENSG00000179163
RP11	ENSG00000229106
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3

MA0135.1

chr1:24125687-24125700

AAATTAATTAGCC

6.41

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_23543	chr1:24123947-24128389	Colon_Crypt_1
SE_25323	chr1:24124955-24128333	Colon_Crypt_3
SE_31820	chr1:24116054-24129044	Gastric

Enhancer Sequence

ACCTGGCCCA GGATACAGAG TCTCAGAGGT GGCTGAGGCT GCCTGCTCAG AGCTTCCTTC 60
CCACTGGAAT CCTGCCCCCT AAGCTCGCTT TGGAAGGAGG CGGCAGTGTG CCCTAGGTAC 120
CAGACTGGCT CAGAAGTCAG CCCTGGGGCA AGTCTGGGTA CCATCACTTT CTGGCCTTAG 180
GCTTTGGAAA TTAATTAGCC TCTTGGCCTC AGTTTCTATC TCTGTAAAAC AGAGCTAATA 240
ATTGTATAAA CTTCATGAGG CAGCGTGAGG GTTCAGTGAG GTGATCTTAA GGGCCCGCCA 300
CAGCAGAGCT GGGGAGACCT GACACACAGG CACCTTATTT TCTAGTTCCA 350