Tag | Content |
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EnhancerAtlas ID | HS176-00288 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:19756110-19757710 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Sox3 | MA0514.1 | chr1:19756464-19756474 | CCTTTGTTTT | + | 6.02 |
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| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_00361 | chr1:19746887-19757387 | Adipose_Nuclei | SE_01631 | chr1:19755843-19757681 | Aorta | SE_02919 | chr1:19755911-19756933 | Bladder | SE_04046 | chr1:19756053-19757455 | Brain_Anterior_Caudate | SE_05833 | chr1:19750586-19757279 | Brain_Hippocampus_Middle | SE_09593 | chr1:19755451-19756990 | CD14 | SE_18410 | chr1:19754667-19757430 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19269 | chr1:19755104-19757108 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_23237 | chr1:19755928-19757811 | Colon_Crypt_1 | SE_25786 | chr1:19750802-19758037 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19754835-19758103 | Esophagus | SE_28668 | chr1:19755603-19757198 | Fetal_Intestine_Large | SE_29645 | chr1:19755678-19757560 | Fetal_Muscle | SE_31164 | chr1:19754803-19757992 | Fetal_Thymus | SE_31447 | chr1:19755938-19757724 | Gastric | SE_41031 | chr1:19755895-19757535 | Left_Ventricle | SE_42185 | chr1:19755689-19757735 | Lung | SE_45110 | chr1:19755943-19756940 | NHLF | SE_45720 | chr1:19751083-19757454 | Osteoblasts | SE_46635 | chr1:19755894-19756886 | Ovary | SE_47234 | chr1:19755677-19758314 | Panc1 | SE_48688 | chr1:19755923-19757600 | Right_Atrium | SE_50058 | chr1:19755847-19757828 | Sigmoid_Colon | SE_51211 | chr1:19755657-19757588 | Skeletal_Muscle | SE_52345 | chr1:19754876-19757871 | Small_Intestine | SE_54550 | chr1:19750611-19758089 | Stomach_Smooth_Muscle | SE_56083 | chr1:19755047-19757873 | u87 | SE_65446 | chr1:19755872-19757833 | Pancreatic_islets | SE_67779 | chr1:19755047-19757873 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 19756629 | 19757043 | chr1 | 19756200 | 19757454 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I019422 | chr1 | 19749273 | 19757876 |
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Enhancer Sequence | ATAAAGGGTA GGAACTCTCC CAGAGAGTAA AGCACATGGC TTATCTGCCA GGACTTTTAC 60 ATAACATTTT TTAGGTGCTA GAGGGTCCTT TCTGCCTGGA TTTTTCCCTC ACTTGACACA 120 GGTTTTCCAT TCAGGCTGCC AGGAGTCTCT AGAAAGGTAG GCGGAGTGTT ATGTCAGTTT 180 CCAAGTCATT AAGCACCCAC AAAGGAGGGC AGGCTTGCAC AGCACTCACT CCACACAACC 240 GCCCCTGCCC TGAGTACGAC GGAGCACATG GCTTCCCTAA AGCCACAAGG AGAAGAGAGG 300 CAGGGACAGT GAGAGCTGAA GGAATTCCAC ATGTGTCCAT GGAAGATCAC CTTCCCTTTG 360 TTTTCCTGCA CTCTAGTAAC TCCCTCATGC AGCTTGCTTT CTGAAGCCCT CTGCTCCATT 420 TCCCCAGCCC AGGACAGCAT CAAGAAATAT TTCCACCATC TCATCTATTT GAACCTTCTC 480 CCTATTTACT GGTGCTCCCA ACCCCATCTG AGGCCATCGA AACCAGACAA CTGTGGCAGC 540 ACTAGCAGAG TCCCCAAACT ACCCTGACAC CCTCCCTGGC AAGGAAAATT TCCACGCGCC 600 TCTCCCTGGC ATATTTATTC CAGAGGAAAA CTTAGCAACC TACACACTAC ACACAGGCTC 660 TGTGTCAAAC TCTACAACAG CCATCAGTTG ATCTTTCCCT TACACATCCC TCCAGGAAGT 720 GAAATATCCG AAATGAGTCA TACTCAGGAG TCGGAGCTAT ACTTCCACTG TAGTTTTTTT 780 GGATAACCAA TTCACTGTTT ACACTCCAAA ACCTCTAATT GCTGAACACA GAACAGTTCC 840 TTTGCAGAGA TCAAAGCTTA CCTGGTGAAC CTGGCGAAAT GACAAAAATT CTCCAAAAGG 900 AGTTAGCCAT CCAGAGTGCC AGAGGAGGGT GGCTGTACAA GCACATTTTA ATTGGCAAAG 960 CAGAGTCGCT GCCCAGCAAG GAAGAGTATG CAGGGGTTTA TTCTGCTGCT CTTCTATTTC 1020 CCCTTTAAGG CATATATCTC TTACCCCTGC ACCCACCAAC TTTAGTCACT CCTAGCACAC 1080 AGCTGGCGGC CGCCCACCCG CACCCGCACC TGCACCCGCA CCTCAGAGAG CTTGCTGATC 1140 CCTGAGCCGT GCACTGAAGC TTCCAAGCAG CTCTACCTAA AGGCAAGCAC TGCCTGCTTT 1200 TTACAACATA TACAATGGGC TAACCTGATG CACAGAAAAA CCCTGGGTCA CATGACAACC 1260 AACAAACTCA TTGCTCAGGA TGGCTCTCCG CCACGTTTCT CAGGCACTGT GCTTGGCTCT 1320 GCTGGCCAAC TGAGTGAGCT GGAGCATTTT CTCTTGGGTG TGCATACCCC TCCACCTGTC 1380 CAACTTTAAA ACACAGAATC AACAGGGATG TTACACTAAA GGGGACCCTA GAAACCATAT 1440 AAACGGTGGA AAATTGAGGC CTGGACTGAC CCATAACAAA TGAGACATCA CATAATGGCA 1500 AATGAACCAT GACCAGAAAA CAAATCTCTT TAGTACACAG TTTAGCGCTT CTGCTTATAC 1560 AGGTTGAACA GCCCTAACCC AAAAATCCAA ATCCCAAACT 1600
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