Tag | Content |
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EnhancerAtlas ID | HS176-00218 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:16499490-16500720 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
MAFF | MA0495.3 | chr1:16500147-16500162 | CTGCTGACTCAGCGC | - | 7.07 | MAFF | MA0495.3 | chr1:16500147-16500162 | CTGCTGACTCAGCGC | + | 7 | Spz1 | MA0111.1 | chr1:16499568-16499579 | AGGGTATCAGC | + | 6.32 | ZEB1 | MA0103.3 | chr1:16500289-16500300 | GGGCAGGTGGG | - | 6.14 |
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| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_23091 | chr1:16499347-16501823 | Colon_Crypt_1 | SE_23751 | chr1:16499364-16501671 | Colon_Crypt_2 | SE_24743 | chr1:16497841-16502803 | Colon_Crypt_3 | SE_26540 | chr1:16496436-16504779 | Esophagus | SE_28102 | chr1:16497879-16504574 | Fetal_Intestine | SE_29455 | chr1:16497964-16506131 | Fetal_Intestine_Large | SE_31527 | chr1:16499336-16504399 | Gastric | SE_34268 | chr1:16497740-16504248 | HCT-116 | SE_34628 | chr1:16497415-16506115 | HeLa | SE_36144 | chr1:16498765-16501519 | HMEC | SE_38062 | chr1:16499064-16503878 | HUVEC | SE_44998 | chr1:16499693-16500212 | NHLF | SE_46140 | chr1:16499323-16500582 | Osteoblasts | SE_47150 | chr1:16499250-16512083 | Panc1 | SE_47539 | chr1:16499523-16500148 | Pancreas | SE_47539 | chr1:16500355-16501118 | Pancreas | SE_50427 | chr1:16497958-16504232 | Sigmoid_Colon | SE_52536 | chr1:16497970-16501408 | Small_Intestine | SE_56795 | chr1:16499345-16504738 | VACO_400 | SE_57357 | chr1:16499350-16500174 | VACO_503 | SE_57357 | chr1:16500236-16501136 | VACO_503 | SE_57939 | chr1:16499369-16500862 | VACO_9m | SE_64726 | chr1:16499137-16501292 | NHEK | SE_65472 | chr1:16498579-16501949 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 16499607 | 16500371 | chr1 | 16499761 | 16499895 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I016171 | chr1 | 16497941 | 16511884 |
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Enhancer Sequence | GGAGGCACCC TCCACCTTCG GATTGCTAGG AGATCAATGT CTGGCCCCGA GTGGGTGAGG 60 CCAGCCGAGG TCACTTGAAG GGTATCAGCC CTGAGGAGGA GTTCACGGGG CCTCTTCCTC 120 TCGGCCAACC CCAGCAGAGC TTGGAAACTG AGGCCCAGAG CAGGAGTCCA GGCTCATAGA 180 GCCGGCCTGG CAGAGGAGGG GTGGGGGAGT TGCGTCCCCA CCATTCCCAC TGGGGCATAC 240 AGCGCCTTTC TGAGCGTCAC AGGCCTGTCT GTGTCCTTCT TTTGCGGAAG AACTAACCAC 300 ACCTCAGGTT CCCCTTATGA AAGACAGAGG CTGAGGAGAG TGAGTCAGTT TTATTATATG 360 AGATAAGGCG GCTGGACAAA GCAGCGACAC AGGGACTGGC ACACAGACAG TGCTCAGCGA 420 AGCAGTCGCC TTCCTTCAGG TCTGAAATCC TCACTCAGCT CCCCAGCTTC TCTGGGGGAT 480 CTCCCTTCCC CTCTCTGGAC CCCTGGGCCT GACTTCCCCC ACTACTCCCA GCCTTTGTCC 540 CACTCCTGCC CCAGGCACCC CTCCCTCCTT CATGGGAAAT GGAGCTTCCT CCTCTGGTCC 600 TGCCACCACC TTCCTGGTGA GGGTCGGGCT CTGCTGGGAG TGCCAGAGCT GCCCAGCCTG 660 CTGACTCAGC GCCTGGGGAT AGGGCTTGCT TTAGGAACAG CCCAGGCCTC GGGCAAACAG 720 AGCCACGGCA ACCACACCCC TGCCACAGGA ATGCAGCAAC ATTCCTGGGG GGTGCCGTGG 780 CACCGTGCCT GTGACTGGGG GGCAGGTGGG GGGCAGGTAG ACACCTGCCT CTGTTACCTT 840 GCCACAGGTA GAAGGGAGCC AGGAGTCAGG GCCCAGTGTC CTGGGGCAGG GGGATGGAGT 900 GAGGTCATGA GGCTTTGAAA TCTGTACCAG CCATGTGACT TGAACAAGGC CTCTCTGAGC 960 CTCAGTTTCC TCACCTGTAA GGTGAAGGGA GAATAGCGGT AGCCTTCTGG TGGGCTTATG 1020 GGGAGGACTG AACGAGAGTG CGCCCGTCTG GGGCTCAGCA TCAGCCTGCC TCACCGTGAG 1080 GATTCCGTGA AGCAGACCCT CACCCCTGTA ATAGAATCAG GGGGTCTTCT GGCTCTGGGC 1140 CCTAGAATGG GGCTGAAGCC CAGAGAGGCA GTTGCACCTC CCCTAGGCCA CACAGCAGGT 1200 ATAGGCCCCA GGGGCTGAGT GCCCATCATG 1230
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