| Tag | Content |
|---|
EnhancerAtlas ID | HS176-00089 |
Organism | Homo sapiens |
Tissue/cell | SK-N-SH |
Coordinate | chr1:8537170-8537950 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF1A | MA0046.2 | chr1:8537189-8537204 | AATTAATCATTTACA | + | 6.64 | | HNF1B | MA0153.2 | chr1:8537190-8537203 | ATTAATCATTTAC | - | 6.71 |
|
| | Number of super-enhancer constituents: 5 | ID | Coordinate | Tissue/cell |
| SE_00045 | chr1:8536898-8538135 | Adipose_Nuclei | | SE_03947 | chr1:8536996-8538772 | Brain_Anterior_Caudate | | SE_04978 | chr1:8535936-8538833 | Brain_Cingulate_Gyrus | | SE_11255 | chr1:8536898-8539106 | CD20 | | SE_51176 | chr1:8536894-8538072 | Skeletal_Muscle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I008477 | chr1 | 8537061 | 8537661 |
|
Enhancer Sequence | TTTAAATGCA ATTATGGATA ATTAATCATT TACATAGTTA ACATGTCTAC AGCCTGACTT 60
CTTTTTTTAT AAATGCGAGA TCAGCCACAG AATAGTAGAA AGGGAGGGTG CGGAGGGTGT 120
AGGCTGCTTG CCGGGGCAGG AGGACTCCAC AGACGCAGTC AATAATCTAC TAAGAAGACT 180
CAGCTTGAGG ACCCACAATG AGTCTAACTC TGGCCACAGG GAGAAAAGCT CCTGGCACAT 240
TCGTGAACCT AGACTGTTTA TGCTGCTTTT CTCAATAATT ATTTGTCAGC TGAGAAAGAC 300
CTATGTCTGG CCACAAGTGG AAATGGTTCA GGACCACAAA TGGAAACTAA AATATGTTTT 360
CACTTACTCC TGGCATCCTC ATAGCCTTGA AAACAGAAAA AAATTTGTGA CATGAAACTG 420
GGCAGAAGGC TGGAGGATGA CATAAAAACC ACAGGTCTAA GCATCTCACG TAGGCACTAG 480
TGAACCTACT CATACATGCT AAATTGACCT AGAAAGTGTA TGTGAAAGGC TTTCACACAA 540
AAACACAAAA TCAAGACCAG TTACATCAGT ATTAAGAAAC ATTTACAGTA ACTGCTTTAA 600
ATCCTACTTA GTAGAATTGA GGTACAGAAA TAACTGCCCC CAATCCAAGG GCTCAGCAGT 660
CTGAATCTCA GTGCTTTGTG ATGAGTGATT CTAAGGTTAT GCAAACAACA GTCCACCTAA 720
TATTTTTGGC AATGATAATG AAGTTATGGA ACAACGAAGA CCGAAGAGGC ATACACTGAT 780
|
