Tag | Content |
---|
EnhancerAtlas ID | HS175-17364 |
Organism | Homo sapiens |
Tissue/cell | SK-N-MC |
Coordinate | chr20:43244640-43246100 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
KLF14 | MA0740.1 | chr20:43245418-43245432 | GGCCACGCCCACTC | + | 7.19 | Klf12 | MA0742.1 | chr20:43245418-43245433 | GGCCACGCCCACTCC | + | 6.25 | SP1 | MA0079.4 | chr20:43245416-43245431 | CGGGCCACGCCCACT | + | 6.02 | SP3 | MA0746.2 | chr20:43245418-43245431 | GGCCACGCCCACT | + | 6.92 | SP4 | MA0685.1 | chr20:43245416-43245433 | CGGGCCACGCCCACTCC | + | 6.28 | SP8 | MA0747.1 | chr20:43245419-43245431 | GCCACGCCCACT | + | 7.22 | ZNF263 | MA0528.1 | chr20:43244769-43244790 | TGCTTCTCCCCTCCCTCCCCT | - | 6.2 |
|
| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_00279 | chr20:43242343-43246269 | Adipose_Nuclei | SE_01271 | chr20:43244070-43245098 | Adrenal_Gland | SE_01849 | chr20:43241967-43245916 | Aorta | SE_03744 | chr20:43242191-43246486 | Brain_Angular_Gyrus | SE_04325 | chr20:43241985-43249405 | Brain_Anterior_Caudate | SE_05260 | chr20:43240623-43249747 | Brain_Cingulate_Gyrus | SE_05994 | chr20:43240850-43251946 | Brain_Hippocampus_Middle | SE_07387 | chr20:43240502-43249639 | Brain_Hippocampus_Middle_150 | SE_08237 | chr20:43241683-43249633 | Brain_Inferior_Temporal_Lobe | SE_10988 | chr20:43236447-43252402 | CD20 | SE_25405 | chr20:43241977-43245373 | DND41 | SE_40873 | chr20:43242209-43246478 | Left_Ventricle | SE_42448 | chr20:43242079-43246286 | Lung | SE_48409 | chr20:43242859-43246238 | Psoas_Muscle | SE_48778 | chr20:43242182-43246514 | Right_Atrium | SE_51576 | chr20:43243305-43246070 | Skeletal_Muscle | SE_54142 | chr20:43243411-43245157 | Spleen | SE_54929 | chr20:43242304-43245486 | Stomach_Smooth_Muscle | SE_58424 | chr20:43199983-43247676 | Ly1 | SE_60908 | chr20:43204757-43248014 | DHL6 | SE_61654 | chr20:43199842-43247312 | Toledo | SE_62478 | chr20:43204535-43247707 | Tonsil |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I044613 | chr20 | 43242338 | 43245708 |
|
Enhancer Sequence | CCAGGCAGAA CCTCCACAGG CTCACCCTGC TCGCCTCTCC AGCATCAACT CTCATCCTCT 60 CGCCAGCCAT AGTCAAGTAC TTTGATCGCT CAGAAGCCCC TGTGGGCCTT CACACGCTGC 120 ACCTCTGTTT GCTTCTCCCC TCCCTCCCCT TGCCTGGCTG GGTTCTCTTC ATTCTTAGAG 180 ACCCAGGCAT CTGCTCAGCT GAGAAGCCTT CCCTGACCGC AGTACCCCTC CCAGACCGGG 240 GAGGCACCTC TTCTCCCTGC TGCCTCCATG AGCCCACTGA GCATAATGGC CCTGCTCTAG 300 ACTGAGCTTC TCCAGCACAG GCTCTGTGTC TTGTGCCCTC GGTGCCTGGT GGTGTTTGGC 360 ACATGATGGA GGTACCGAGT CAATGGCTGT TCATTGACCG ACTGAATGAC CAGCATGTCC 420 AGCTGCCACA CTGGGCACGC TGCCCTGGGC TCTCTCTCAA GGCTTCTGTG TCCTCACCCT 480 CAGCTCTGGT GAGCTCTGTT CTGTCTCTCT CTCCCTCAGC AGTTGTAGCT GCTGGCCCAT 540 GTGCCCAGGC TCTCCTAACA CCTGTTTTCC CTGACTCAGA TTCCCTAAAG TATGGGTCCT 600 CTGGCTACAT GACATTCACC TGCCAGGGTG ACTGACATTT AAAAAGGGGG CCTGAGGAAA 660 GAACAGTGCT CACTGAAGGA AAGGAAACAC TCACGGTGGC GTCCAGGCAA GAGTGACTGG 720 CCAAGGAGCC TTCCAGGAAG CCCGCAGGGA GCAGTTCCGT TTCACAGGCG GGGCTGCGGG 780 CCACGCCCAC TCCAGCGACT CCCCAAGGCA GGGGGAGTAC AGAGTTCCAG GCGCCACCCC 840 GCTGGGAATA AAAGCAGGCT TTCCAGGCAG CGGGCTCGGA ATAGGGTCCC GAGCTACCAC 900 CCACTTCCTA GCTTGCCGCA GGGGCACAGT GAGGCAGTGC TGATGTCAGG CCTCTATAAA 960 CCTTCAGGAA TGCTGCTTAT TGGAGGAGGT TAAATTTGGT AGAAGGGGTA CTAGCCTTGG 1020 TGGCAGGCAG GGCTCTCCAC CCTTGATCCA GGCAAATCAG CTCACCTCGC TGGGCCTCGG 1080 TTTTCTCATG CATATCATGA CCCTAGTTAC ACCTCCATGT TACTGTGTGC ATTGCACGAG 1140 AAAGTGCCCA TCCATCTGCA GACCCTGGAG CTTGCTATAG GGTGGTGATT CTCCTGGTTC 1200 TGTGAAGGGC TTAGCCTGAA GGATAAAAAG GTGTGGTCTG GTTGGGCTGG ATTTGAACTC 1260 AGGCCCTCAG TGAGCTTGTA GGGCACCTAG TAACATTGCA CAGTGTCACT GGGGTTTAAG 1320 AATGTACCAC CTATTGAGCT CTGCCCACAT GCCAGGCCCC ACGTGGTGCA CCTTATGAAA 1380 AGACACCTGT TTATCATGCA GCCTGAGGAG GAAAGCATGG AGACTGGGGC CTGGGTGTGA 1440 GTTTGGCACT CCCCTCAACC 1460
|