| Tag | Content |
|---|
EnhancerAtlas ID | HS175-13537 |
Organism | Homo sapiens |
Tissue/cell | SK-N-MC |
Coordinate | chr19:50056660-50058720 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Foxd3 | MA0041.1 | chr19:50056761-50056773 | AAACAAACAAAC | - | 6.32 | | Hnf4a | MA0114.3 | chr19:50056924-50056940 | CCAGGACTTTGACCTC | - | 6.51 | | Nr2f6(var.2) | MA0728.1 | chr19:50057778-50057793 | TGAACTCCTGACCTC | - | 6.22 | | Nr2f6(var.2) | MA0728.1 | chr19:50057871-50057886 | TGAACTCCTGACCTC | - | 6.22 | | Zfx | MA0146.2 | chr19:50057801-50057815 | CCCGCCTCGGCCTC | + | 6.01 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_18817 | chr19:50054487-50069860 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19587 | chr19:50055882-50059429 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_50670 | chr19:50056585-50058623 | Sigmoid_Colon | | SE_62028 | chr19:50036137-50074396 | Toledo |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr19 | 50056800 | 50058600 | | chr19 | 50057932 | 50058504 | | chr19 | 50057839 | 50057919 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I049552 | chr19 | 50055756 | 50061457 |
|
Enhancer Sequence | AAAGAGCGAG ACTCCGTCTC AAAAAAAAAA AAAAAAAAAA AAAAAAACCC AGCCTGGCCA 60
ACATGGCGAA ACTACATCTC TACTAAAATA CTAAAAATAC AAAACAAACA AACAAAAACC 120
AGCTGGCTGT GCTGGCAGCA CCTGTAGTCC CAGCTACCCA GGAGGCTGAG GCAGGAGCCA 180
GGATCACGCA AGTGCACTCC AGCCTGGGCA ATAGAGCAAG GCTCCATCTC AAAACAAAAA 240
AAAAAATGAC AGAACAGATT GGAGCCAGGA CTTTGACCTC CCCACCCTGC ACTGCACAAA 300
GAGTCTGTGA ACAGAGTGGT GTTTGAGTTC CTTTGGGAAA ACACAGGTGC AAGATTAGAA 360
ACCCTTCAGG TTATTACTGG GGGCACCGGT GATCTGTTCA ACATATGAAC AAGACTGGGG 420
TTCTTAGATG GCTGAGAAAG CTGGAAGGAC TCGGGTGGTT GAGAGGTCTT GAGAAAGAGG 480
ACAAGGATTA GGGATGTGGA AGGAAAGGGT ATGACATGGA ACTCTGGGTA TGGAGGGATG 540
GGGTGGGAGC TTGTGGAGGT GGAGAGGCCA GTGGGTCTCT AGGGGAGGGA GGACATGAAG 600
GATGGGGGAA GTCCAGGACA AAGTCTGGGG GCGTCTCAGA GGAAACTGGC TCCTGGGGGA 660
ACCTGGCTTC CGTCACTCCC TCGAGCACGT GTGACTTTGC TCAAGTTGTG CCTTCTCGAT 720
CATGCCATTG CACTCCAGCC TGGGGAGTGG AAAAGTATTA CTCACTGAAC AGGATGGTGC 780
ATGCACTGTG ATTCACTTTG GTTGAAACCT CATGTGTACT CACATAAAGA ACAGGAAGGA 840
CAGAACCTAG GTGGCATTGC TCTGCGAGGC AGGAATGCTG TGTTTTTTGT TGTTGGTGTT 900
GTTATTGTTG TTTTTTGAGA CAGAGTCTCA CTTTGTCGCC CAGGCTGGAG TGCAGTGGCA 960
CGATCTCAGC TCACTGCAAC CTCCGCCTCC CGGGTTCAAG CAATTCTCCC GCCTCAGCCT 1020
CCCGAGTAGC TAGGATTACA GGCGCCGGCC ACCACACCCG GCTCATTTTT GTATTTTTAG 1080
TAGAGATGGG GGTTTCACCA TGTTGGCCAG GCTGGTCTTG AACTCCTGAC CTCGTGATCC 1140
ACCCGCCTCG GCCTCCCAAA GTGCTGGGAT TACAGGCGTG AGCCACCGCA CCCGGCTATC 1200
TAGGCTGGTC TTGAACTCCT GACCTCAAGT GATCCACCCG CCTCAGATTC CCAAAGTGCT 1260
GGGATTACAG GCGTGAGCCA CCGCACCCGG CCTGTCTTGT TTTAATCTTT GCTTGTCTCC 1320
GTGCTGTTTT TCACACTGCC CAGCAGCTGC TTTTGTGACT CAATGGTTAT TAAACACAAG 1380
GCCTTAAGGA CAGCCCCTAC ATTCCCAGTC AAGTCTGACG CCACCGGGCT GGTTCCTGGT 1440
CCCCGCTCTG CCCTGGCTCC CTCACTCTCC CCTGTACGCC CTCTGCTCCT TAAATCTGCA 1500
AAGTGCGTTG CTGCCTCTGG GCCTTTGCAC TCGCGGTTTC CTCTTCCTTT CCCCCTCAGG 1560
CTGCCACAGG TGGGGGCGTG ATGCTCCTGA CCGCCTTTCC TAGTCCGGGT GCTGCGCACT 1620
TTTTCACAGA ACTGCACTTC CTTTGTGGGT CTAATCACAC TGCAGCCCGG AAGACACGTT 1680
CCTGGGCATT TCCTGTTCTT CAAACCTGGC AAAAATCCGG GAACCCTAAC AAAGAACTCG 1740
AGAAATTTCT ATGTAGCTCA TTAAAGTGGC GCACTCACAC GGTCTTGGCT TAGACTTGGA 1800
CTTCCGGCCA CTCAACCAAT TTTAATGCTG TGCATTTGCG TTCTATTCAG GTTTTTTTTT 1860
TTTTTTCTTC TTTGAGATGG AGTCTCGCTC TGTTGCCCAG GCTGAAGTGC AATGGTGCGA 1920
TCTTGGCTCA CTGCAACCTC CGCCTCCTGG GTTCAAGCGA TTCTCCTGCC TCAGCCTCTG 1980
GAGTAGCTGG GAATACAAGT GCGCACCACC ATGCCCGGCT AATTTTTGTA TTTTTAGTAG 2040
AGACAAGGTT TCACCATGTT 2060
|
