Tag | Content |
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EnhancerAtlas ID | HS175-11441 |
Organism | Homo sapiens |
Tissue/cell | SK-N-MC |
Coordinate | chr17:40558680-40560660 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr17:40559400-40559420 | ACACCACACACACACACCCC | + | 6.11 | TP63 | MA0525.2 | chr17:40559721-40559739 | GGCATGCTGGGACTTGTA | + | 6.12 | ZNF263 | MA0528.1 | chr17:40559161-40559182 | ACTCCCTCCCCCACCTCCACC | - | 6.21 | ZNF263 | MA0528.1 | chr17:40558737-40558758 | CCACCCTCCCCCACCTCCACC | - | 6.26 | ZNF263 | MA0528.1 | chr17:40559164-40559185 | CCCTCCCCCACCTCCACCCTC | - | 6.26 | ZNF263 | MA0528.1 | chr17:40558740-40558761 | CCCTCCCCCACCTCCACCTTC | - | 6.97 |
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| Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
SE_00115 | chr17:40550103-40579058 | Adipose_Nuclei | SE_02189 | chr17:40558550-40560596 | Aorta | SE_13886 | chr17:40558791-40559947 | CD34_Primary_RO01536 | SE_13886 | chr17:40560030-40560531 | CD34_Primary_RO01536 | SE_26078 | chr17:40558435-40560343 | Duodenum_Smooth_Muscle | SE_26986 | chr17:40558591-40560696 | Esophagus | SE_29743 | chr17:40558544-40560655 | Fetal_Muscle | SE_41037 | chr17:40557721-40560623 | Left_Ventricle | SE_42619 | chr17:40555828-40560743 | Lung | SE_44634 | chr17:40558734-40560724 | NHDF-Ad | SE_45520 | chr17:40558917-40559903 | NHLF | SE_45847 | chr17:40558566-40560435 | Osteoblasts | SE_46981 | chr17:40558906-40559320 | Ovary | SE_46981 | chr17:40559334-40559961 | Ovary | SE_48467 | chr17:40558425-40560690 | Psoas_Muscle | SE_48984 | chr17:40558587-40560605 | Right_Atrium | SE_51352 | chr17:40558208-40560732 | Skeletal_Muscle | SE_52922 | chr17:40558578-40560076 | Small_Intestine | SE_53648 | chr17:40557706-40560845 | Spleen | SE_59315 | chr17:40514717-40567820 | Ly3 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 40559988 | 40560462 | chr17 | 40558687 | 40560061 | chr17 | 40560079 | 40560603 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I042405 | chr17 | 40557920 | 40564389 |
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Enhancer Sequence | CACTGCTCCT GGCCTCAAGC TATTTCAGAA CCAGCCTTAG AGATGGAGAA CTGTGGTCCA 60 CCCTCCCCCA CCTCCACCTT CTTTGACTCC TTCATACTGT TTGGCTCCAC CAGTGGTCAT 120 TCTCCCCCTC CCCCACATTT AGAAATTGAT ATTGGAAAGA GGAAGAAGCT GGCTGGGAGC 180 CACGGACATG TTTTCTCCCC AGTCTGGACA TTTCTTCTGG TTGTGACTTC CCTACTTTGG 240 GATAGAAGAG AGATTACTTT TCAATTCTTG CTTTCCCTAC CCCCTGCCCC CAGCACAAAG 300 CCTGAGCTCA GGGGTCTAGG AGTAGGATGG GTGGTCTCAG ATTCCCCATG ACCCTGGAGC 360 TCAGAACCAG TTCTTTGCTT TTCTGTCTTC TCCTTGGAGG ACTTAGCACC AGAACTGCTT 420 TCCATTCCGG GAAGATTTTC CAAGATCTTG ACTCTGGCCA ACATTTCAGA ATCTCTGGAT 480 CACTCCCTCC CCCACCTCCA CCCTCATCAG AGAGCAGGGG AGGCTGAGCA CAGAAAGGGA 540 AAGGGCAGAC CAAGATCATC AATAGGATCT CTTTGGCCCA GACTCCCTTT AGTGACTTCA 600 AATGAAGGAA CGAGAGATAG TCGCTTTTCT AAAGGGTTTT CTGAAGACCA TTTCCCAGAA 660 TTATAAGAAA AATCCTGTCC CCTAAGAAAT TAAGGCAACA TAAACTGAGT CCTCTCACTG 720 ACACCACACA CACACACCCC TATACATAGG CTGCTCGGTA TCTCTGCACC ACCTGCTACA 780 GAAATTCCTT CCCCAGCCCC CAACCTCTTT CCTCTTCCCT CCCATCAACA TCCCCCCAGA 840 GTTTCCTGGT TTACACTGAA AACTAGGAAC ACCCTCTCCC AACTTCCTTC CCTTCTTGTC 900 AATAGCATTA GCAGGGACAA AGAGGGAATG CTGGCTCCAC CTCTTCTCTC ATCTGGGCAT 960 CAGCTCTGCT GGGCACCAAG CCACCTCCAG CTCTCTGTTA CCCAACTACA CCTCCCAGCA 1020 GGCAAGGTGA CCTGGGCACA GGGCATGCTG GGACTTGTAG TCTCTACCTG CCATAGACGG 1080 CTTAGTGCAG ATCATGGGCA ATCCTAGGGC ATTTTGTTTA TCCCTCTGCC TCTTATCATT 1140 CACTGAGGCA TTGAAGGGTG TTTTCCTTGT TCTGAGTGTA GGAGAGTCTC AACTTCTCTT 1200 TGCATTCCCT CTGATTTCCA GTCATTCACT TTGGGGCTCC TACAATCACC CTTACCCTGC 1260 CTGCTACTGG AGTGCATATC ATTTAAGACT TATACATCAT TGTAGGATCT AAACCCTCTT 1320 CATCCATCTC CACCCAGAAT TTACCTGCAG CCCCAGTATA TATATATATT AAAAAAAATT 1380 CAGCTCTGAT CTTTCCTTCA TAACCTCCCA GACTTAAAAA CCCACCCACG CCCCACCAAA 1440 GGGTGGAGAG AGCCCCTCCT TTCACTAAAC TCAGACAATG TGAATAGGCT AGGGAGGGAT 1500 TAAGGGTGAC AGGCAGGGAA TAGTCAGGAA ACAGCCCCAG CTGCTGGAAA ACAAATCCAC 1560 TTTGTCTCTC TGCCCTACCC CCAGCATCCC CCGCTTCTCC CCTACCCCTG CTGCCTGCTC 1620 CACCCCACCC CTAAAGGCTG AGCTGGCTGG TTTTCCTGGC CTGTGGCTTC CTAGATAAAG 1680 GTCTTTGCCA GCTGAACTTG GAAGTGAATG GGACTGGGGA GAGAGCTGCA GACTTCTTAT 1740 AGCCAATGCC ATCTTCCTAG TGCCTCATGA AAGGTCTCAA ACTACAACAT AAGGAAGCAA 1800 TCCTAGTGAG AGGAGGTTTT TGTTTTTTAG TTTTTTTGTT TTTTTTGAGA TGGAGTTTTG 1860 CTCTTGCTCC CCAGGCTGGA GTGCAATGAC ACGATCTCGG CTCACCGCAA CATCCGCCTC 1920 CTAGGTTCAA GCAATTCTCC TGCCTGGGCC TCCCAAATAG CTGAGATTAC AGGCATGTGC 1980
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