EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS175-01001

Organism

Homo sapiens

Tissue/cell

SK-N-MC

Coordinate

chr1:66726500-66729130

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx3-2

MA0122.3

chr1:66727800-66727813

ATAACCACTTAAT

7.34

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_08075	chr1:66728416-66732726	Brain_Inferior_Temporal_Lobe
SE_33961	chr1:66725925-66729177	HCC1954
SE_34252	chr1:66725725-66734411	HCT-116
SE_46276	chr1:66727517-66728833	Osteoblasts
SE_51219	chr1:66726473-66734314	Skeletal_Muscle
SE_55746	chr1:66725883-66739898	u87
SE_59455	chr1:66712945-66767925	Ly3
SE_61005	chr1:66702198-66767701	HBL1
SE_67913	chr1:66725883-66739898	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I066260

chr1

66726159

66728929

Enhancer Sequence

GCCATAGCAC AGCTGAAGCA CAGCCCTTCC CACACTCTGG CTGAGGACTA CCCTTCAAAT 60
CACGGCCCCT TGTGTCACCC TTGGTCCAAA GCAAGCCATG CTTATCACAA AAAGCAGGCC 120
TCCAGTGGTA AGATAGTTGT ATCTAATGAT CTTTCTCAAA TTCATACCCA TGTGTACAGA 180
GTTGATCCTG TTACTGATTG CAAGTACTAC CTTGTCACCA ACAAAAATTC AAGAGAGGGC 240
ACATTTACCA CTAGAGCTTC ACCAAAGGGA GTTGAGAGTG GTGCAGTCTA GCTCAGACTC 300
AGTCCTGAAT AATGGATTTC AGACATCAGG GAGCTGAAAT CAATGAAATC AATTAGCCAT 360
CTCTGGAGCA GTCTGGCAGG GGCAGGCTGG AAAACTGAGT GTCCATTTAA TGCACTCCAT 420
TTTATTTCTA GATAGTGAAT ACCTTCAAAC AACTAAAGAA AAGCCAAGAG AAGGAACTGA 480
AGACAATAAT GTTTGGCAGG AATGGATACA ACATACAGAA AGCATACCCC CACCCGAACA 540
CACACACAGA CACACACACA AACACTCACA CATATACACA GAGTTATCTT AACAGCTGAA 600
ACTGTAGAAT TCATGGAACT CAGATATTCC TTTCTGATAT ACTTGACTTC AGATCCAGGG 660
TGCCACTCCC TGCCTTGAAT GTAGCATTTA AGCAATAATT GTGTCCTAGG AGTGGTTTTC 720
ATGAGACATC TGGTTAGTGT GGTTTATTGT AGGAAAAGGA ACTCCCACAT AGAACTATAC 780
TTCTCATAAG TCAAGATTTC TTTTATCTTT TGGCTCTTTG CTGTGCATAA AAGCAGTCCA 840
TTGTCTGCTT GTGCTTTACC ACTCAAAGGG TGGAAATCTC AAAGTTCCTG TTGAGGTGGT 900
TTCCTTGCAC CTTCATGAAA TATCCCATTG AGGGATGCTT GATTGGACCT GTATTTCTTG 960
GCTGCAAATT AAAACCTACA CTTCCTTTGT CCCAGGAGTT AATTTTGAAA ATATGGCTTT 1020
CATTTAGAGT TGTTAATTCA GATAAGCGTT CTTAAAGCAC TTGCTGACTT TAAACAGACT 1080
GCTGGAGTAA TCAGGTGCGC AAGTGAGTGT GCCCACCATT CAGCAGTCTG ATAGCCAGGG 1140
GATGGAGCTG GGAGCAAATA GGTGTCATTT ATCAATCGAC TCTGTCATCA ACATCATGAA 1200
TGTCACCTGT GGCTATCAGG AAATAATGTA ACTTCTTTGT ATTAACATTC TTCCAAAGCA 1260
TAATTTAATG AACATGTATG TAATCTTCAG GAAAGAACTA ATAACCACTT AATTTTTTTA 1320
GTGCATATCT ATCCAAAATG TCTTTTATTG CTGTATGTAC TTTGGCATGT GAATTAAATT 1380
AACTGAGGAT CATAAAATGT TTAGCGTTCA GAGCTGGAAT GAACCTAGCC AAATTTCCTC 1440
AGATGAAGTG AAGCAACATA GGTAAAACTC CTCACACAGG ACTCAGTACG TTGTAAATCA 1500
CCAGTAAATG TTAGTTGCTG CCTGCTCTTC TCAAGTGAGG AAGAAACTAG GAGGTTCCGT 1560
GAATTGCCCA AGGGCTATAC AGTGGGAAGG TGCCAGAGCC AGGATTAGGA TTCCTGTCTT 1620
CTTAGTCACA GTCCAGTTCT GTCTCCACTG TGCTATTCAG GGCTGGAAAG TATGAACTGC 1680
TATGGCCATA TTATCTTCCC TATTTATATC ACCATCTTCA GCAATCAGCC ACGTAACTTC 1740
TTATGATTCT TCCATAAGTT ACGGACTTTG GAAACTGAGC AACCAATACC ACTTTCCTCT 1800
GGCATTCCTT ACAATTTTCT GTCTGGCATT CTCATGCCCT ACAAGCAATC ATGTGGCTTG 1860
CAGAAGTCAT TTATTCATTG AAAATGTATT GAGCCTCTTC TTTGCACCAG GTCTCATGAA 1920
TAATTGACAA ACCAAATAAA CATGGTCCCT GCCTTTCCAA AGCTTCCACA CAGAGATGCT 1980
TATCTGAATT GACAACTCTA AATAAAGCCA TATTTTCAAA ATTAACTTCT GAGACAAAAG 2040
AATTTGTATA GTATGAGTAA TTTCCAAGAA GTCATTGAGA GAATTAGGCA CTGTGATTTG 2100
ACACGCTATA AAGAAAGTAG AGATTTCTGA CATTTGGGGT CTCCTAGTTC AGTTTCTTCT 2160
TTCACAAAAG TCTTCTTTGG AACTCAGGAA AAGGTGTAAG ATAAAATTAT TAAAATGCAT 2220
TATTAATCCA GTGCGTATGT GTTGAGTACC TCCATCATAG CAAATATTAT GCCAGATCCC 2280
TGTGTTACAG TGGTGCACAA TGTTCAATCA TTGCTTAAAT TTCTCATAGA TGAGTTGAAG 2340
AGAAAGACAG GAAAATGGGA AATACAATAT AGAATGAGCA ATGCAGTGGT TCAGTAAGCA 2400
CAGGAAACTA CAGAACACAG GTGAGGGCCA CTCACAGAGG GAAGGCTCCT CTGAGGAGGT 2460
GATGCCTGAG CAGAGTCCTA GGACATATGA AAGAGCTAGC CACATAAAGA GAAGAAAAGT 2520
ATCCAACTGA GCAAAATGTG TGCAAAGGCA CAGCAACAAA AGAGAGTGCT GTGTTCGAGG 2580
AACAGCAAGT GGCATATAGA ACCAAGACTG TATGTGAAAA GGAAACCAGA 2630