Tag | Content |
---|
EnhancerAtlas ID | HS175-00219 |
Organism | Homo sapiens |
Tissue/cell | SK-N-MC |
Coordinate | chr1:16493590-16496340 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
PLAG1 | MA0163.1 | chr1:16494542-16494556 | TCCCCTTGGGCCCC | - | 7.12 | RFX1 | MA0509.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | + | 6.38 | RFX1 | MA0509.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | - | 6.4 | RFX2 | MA0600.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | + | 6.6 | RFX2 | MA0600.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | - | 6.73 | RFX5 | MA0510.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | - | 6.26 | RFX5 | MA0510.2 | chr1:16494467-16494483 | CGTCGCCATGGAAACC | + | 6.27 | RREB1 | MA0073.1 | chr1:16494145-16494165 | GGTGGGGGAGTGGGTGGGGG | - | 7.01 | ZNF263 | MA0528.1 | chr1:16494579-16494600 | TCTCTCCGCCCCTCCTCCCCA | - | 6.12 | ZNF263 | MA0528.1 | chr1:16494004-16494025 | GGAGGAGAGGCAGGTGGGAGG | + | 6.37 | ZNF263 | MA0528.1 | chr1:16494576-16494597 | CTCTCTCTCCGCCCCTCCTCC | - | 7.1 |
|
| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_23091 | chr1:16493730-16494938 | Colon_Crypt_1 | SE_23091 | chr1:16495015-16496277 | Colon_Crypt_1 | SE_23751 | chr1:16493699-16494633 | Colon_Crypt_2 | SE_24743 | chr1:16493660-16494922 | Colon_Crypt_3 | SE_26540 | chr1:16493665-16496410 | Esophagus | SE_31527 | chr1:16493631-16494622 | Gastric | SE_34268 | chr1:16493420-16495012 | HCT-116 | SE_34628 | chr1:16493224-16496455 | HeLa | SE_47150 | chr1:16493248-16496088 | Panc1 | SE_56795 | chr1:16493661-16494984 | VACO_400 | SE_56795 | chr1:16495015-16496331 | VACO_400 | SE_57357 | chr1:16493697-16494611 | VACO_503 | SE_57939 | chr1:16493722-16494629 | VACO_9m | SE_65472 | chr1:16493525-16494995 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 16495240 | 16496278 | chr1 | 16493800 | 16494448 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I016167 | chr1 | 16493630 | 16496219 |
|
Enhancer Sequence | ACCACGCCTG GTTAATTTTT GTATTTTTAG CAGAGATGGG GTTTCACCAT TTTGGCCAGG 60 CTGGTCTCGA ACTCCTGACC TCAGGTGATC CACCTGCCTC TGCCTCCCAA AATGCTGGGA 120 TTACCGGCAT GAGCCACTGT GCCCGGCTTC CGTTCTTCCT GATTACTTAA GAGGGGCCTG 180 ACTAATGCCC AGCATGGTTG GGGACCCAGG CCCCTCAAGC CCTGGAAGTC CCTTGCCTGG 240 GGTCATCCAG TCTCCTCCCT CAAAGGGCTC TCACTCCCCA CCGCCGCTCC CTCTCCTCTT 300 CCTGCTGCTG AGAGACGAGA GACCAGCAGA AAGAGACTTG GAGAGACGGA GACACAGAGG 360 CAGATGGAGA ATGCTGGGCG CCCGGGAAAG CCCAGGAAGG AGCCCGGGCC ACGTGGAGGA 420 GAGGCAGGTG GGAGGAGGCA GGAGAGAGCA AGGCTGCCCA GGACAATGGA GCGGGACCGG 480 AGGAGACGCG GGGAGGGACG CGGGCCAGGG GTGCGGTGGG GGGCACGGGG TGGAACTCCG 540 GGTCCCGTAG GGCGGGGTGG GGGAGTGGGT GGGGGGATGG CCCACCTGCC GTGGGAGCGG 600 GTCCGGAGGA AGCTAGGGTC TCGGGGTGGG AAGTGCTGTG TAGAAGCGAG CGCAAGAGGC 660 GAGAGGAAGC GCGGCGGGGC GGCCCCTGTC CCAGCCTCAC CCCCATCCCC CCAAGTCTCG 720 CACCCCGGTC CGCCCCAGCT TCCGGCTCCG CAGGTGCCGC CTTTGAGGGC CGCCGCTCGC 780 AGTTTACCGC GGAGCCGGAG CCAGAGCCCC TTCCCCGCGG CGAGGAACTG CCTCTGCGTC 840 TCGTAAAAGG GGTCTGGGCC TGGGGGGCGG CGGCCTCCGT CGCCATGGAA ACCGGGGCGG 900 GGAGGCGGCG GCCCGGAGAG CCCCATGCAC TTTGCATACC ATTGCAGGTT CCTCCCCTTG 960 GGCCCCGCCA GCCTCGCTGG GCCCGCCTCT CTCTCCGCCC CTCCTCCCCA AACCCATCAC 1020 CCTTGCCTTT ATTTGTCTTA AATTTATTTT AAAATGTATT TATTTATTTT TTTCAAACAG 1080 GATCTCGCTC TGTCACCCAG GCCAGAGTGC AGTGGTGCGA TCATGACTCT CTACAGCCTT 1140 CCATCTCCCC AGGCTCAGGT GATCCTCCCA CCCCAGTTTC CCAATAGCTG GGACCACCAC 1200 GCCTGGCTAA TTTTGTGTGT GTGTGTGGTG ATGTCGCCCT CTGTCACCCA GGCTGGAGTG 1260 CCGTGGCCAG ATCTTGGCCC ACTGCAACCT CCGCCTCCCA GGTTCAAGCA ATTCTCCTGC 1320 CTTAGCCTCC TGAGTAGCTG GGATTACAGG CGCGTGCCAT CACACCCGGC TAATTTTTTT 1380 GGTATTTTTA GTAGAGACGG GGTTTCACCA CGTTGACCAG GCTGATCTCA AACTCCTGAC 1440 CTCGTGATCT GCCTGCCTCA GCCTCCCAAA GTGCTGAGAT TACAGGCGTG AGCCACCGTG 1500 CCTGGCAATG CCCGGCAATT TTTGTATTAT AGAGACAGGG TCTTGCCATG TTGCCCAGGC 1560 TGGTGTTAAA CTCCTGGACT CAAACAACCT GCCCACCTCC GCCTCCCAAA GTGTTAGGAT 1620 TACAGGCATG AGCCACTGCA CTCGGCCACC CCTGCCTTTA AAAGTCACCT CCTCCAGGAA 1680 GCTTTCAGCC ACCACCACCA CGCCCGGTGG CACCACTGAC ACTTCATAAC AATAATAATT 1740 CATCATCACT GTGATCGTGG CTAGGCTTGG CTGAGCTTTG TCTCTGTGCT TCCTTCACCC 1800 CCATCTTCTT CTGTCCTCAT ACCAACCCTG TATGGAGAGG CCACTTTTGT CGATATTTAC 1860 AAATGAGAAA ACTAAAGCTG GTAGGGGGTC TGCTCAAGGT CTCACACCTG GAAAATTCCC 1920 TCCTCATTCT AGTCTCAGTG TTCTCATTTG TAAAAAGGGA AGCTCGCACC AGGCGCTTGC 1980 CGAGTGACCA CGCAAGGGTG GGAATGAGAC CGCAGGTTTG TCTGAGCAGG GGCTGAGTGT 2040 GGCATTCTGA CTCTGAAGGC CTGTAGTCAG GGTATGCATG CTCTAGTTCA CCTCAGCCCG 2100 GCTGCGTCAC ACCCCCACTC TGTCCCCCAG TGCATCCCCA CCCTTGGGAC CCTAAGTGAA 2160 TCTCTCCAGA CCAAGCTCCT AGTGACTCAA GAGACATCTC TAAGGGGTCT TCCAGCTCTG 2220 CCATTCTGAA GTCTTAGCTT ATTGAGAGGG TGACTCCTTG TGCTGTCTCC CTCCTCTGAC 2280 TGGATGCTCC TGGGGGTGAG GGGCTGTGCC TCTCCTGTCA GACGGGACAC TGCTAAGGGT 2340 TAGGACACCT CTGTCACTCC CCTAGGTCTG TGGTCACTAG AAATGCCCAA ATCCAGGCTG 2400 AAGGCTGACC ATGTCTCTCC AAGCACAAGC ACACCCCAAG GTGCCCCAGT CCCTTGTCCT 2460 GATCCTGAGA TCTGAGGTCT ACAGGACTGG GTTCTTGGTG GGGAAACCTC CAGCTCTGCC 2520 ATAAAAAGAA AGCCTCATCC CAGACCTTCA GACCCGTTCC AGCACAGGCT CAGAAGAGGA 2580 GAAATGGGCC CAGAGACAAC TTCCAGGGCA GCAACACCAC AATCATCATC CCTTCTATTT 2640 AGTGATCTTG GCTATGTGCC CAAAACCTTT TTTTTTGAGA CAGAGTGTCA CTCTGTCGCC 2700 CAGGCTAGCG TGCAGTGGCA TGATCTCAGC CCACTGCAAC CTTCATCTCC 2750
|