Tag | Content |
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EnhancerAtlas ID | HS174-03756 |
Organism | Homo sapiens |
Tissue/cell | SK-MEL-5 |
Coordinate | chr20:31050720-31052600 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr2f6(var.2) | MA0728.1 | chr20:31051077-31051092 | TGACCTCTTGTCCCC | - | 6.35 | ZNF263 | MA0528.1 | chr20:31051866-31051887 | GGGGGAGGAGGGGGTGGGAGA | + | 8.33 | Znf423 | MA0116.1 | chr20:31051057-31051072 | GGAACCTAAGGGTGC | + | 7.05 |
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| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_01118 | chr20:31050641-31052207 | Adrenal_Gland | SE_03291 | chr20:31050693-31053756 | Brain_Angular_Gyrus | SE_04048 | chr20:31049325-31056688 | Brain_Anterior_Caudate | SE_04930 | chr20:31047463-31056799 | Brain_Cingulate_Gyrus | SE_05885 | chr20:31047540-31074914 | Brain_Hippocampus_Middle | SE_06864 | chr20:31047400-31057376 | Brain_Hippocampus_Middle_150 | SE_07969 | chr20:31049285-31056646 | Brain_Inferior_Temporal_Lobe | SE_08924 | chr20:31051621-31051946 | Brain_Mid_Frontal_Lobe | SE_23164 | chr20:31050603-31053902 | Colon_Crypt_1 | SE_23809 | chr20:31050698-31052589 | Colon_Crypt_2 | SE_24726 | chr20:31050649-31053909 | Colon_Crypt_3 | SE_27760 | chr20:31049578-31056550 | Fetal_Intestine | SE_28710 | chr20:31049610-31056687 | Fetal_Intestine_Large | SE_31615 | chr20:31050665-31053921 | Gastric | SE_38064 | chr20:31050845-31066068 | HUVEC | SE_42465 | chr20:31050564-31066270 | Lung | SE_47565 | chr20:31050725-31053874 | Pancreas | SE_50168 | chr20:31050560-31057178 | Sigmoid_Colon | SE_52531 | chr20:31050561-31056527 | Small_Intestine | SE_54992 | chr20:31049505-31056649 | Stomach_Smooth_Muscle | SE_65380 | chr20:31049591-31056886 | Pancreatic_islets | SE_69043 | chr20:31050727-31052569 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 31051543 | 31052476 | chr20 | 31050775 | 31050964 | chr20 | 31051243 | 31051335 |
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Enhancer Sequence | AAAAAACTGA TTTAAAAGAG ACATCGACAG GCGCACAAAC CCTTGCTGTG ATGGAATGCA 60 GTGGGGCCCG GGCAGGGATG GTGCTGGTGT AGGGTCCTGC AGTCTGGGCG ACCTTGGGCA 120 CTGCCACCTC CTGGGCCTCC TCTTATCTAC AGTCCTGGGA GTTGCCGCTG ACGCCCTCCT 180 GGGCTCTGGC ACTTTATGAC TCTGTGAAGA AACCCAGCTG GCTCCATGGG CACCGAAGCC 240 CCAGCACACA GGCCTCACGG GGTGCAGGCC TCCAGCTGGG AGGCTCAGTG GGAAGCTGGG 300 AGTTCTGGAT GGACCCTCCA CACCTGGAGC TGGAAGTGGA ACCTAAGGGT GCCCAGGTGA 360 CCTCTTGTCC CCACCTGGTC CCCATCTTGC TGCTTCCATG AGGCCCCTCC AGGAGGGTCA 420 CCCTTGAGGC CAACCTGCTG GGGCCCAGTG TGATGAAAGC AGGGTGGGCC TGCCCCCAGC 480 CCATGGCTGC GTGGGCAGCA GAGACATGTC CTGAGGGGCC TTGGGGAAGC AGCCCGGGAT 540 GCACCCCCTC TCAGCATTTC CACAAAACCA GGCCCTCCCC ACTGTGGCAA AGGGCGACTC 600 CTTCATCTGG GCAGGACCCG GAGCCCACCA CCTGTGCCCA GAATGCCTAC GGGCAGGGAA 660 GGACTGCCGT GTCCGTCTAT TTGAACATGG GGCAATGTGC TGCTATTCAA ATGGAGGAAT 720 TAGTGATGAA TGGGGGAAAT TGTTCCTCCC TCTGTCCCGT CTCCAGAAGG AGACAAAAAC 780 CCCTTTTACC TCAGCAAACA ATGCCCTTAT GTGGGCGCCA GTGCCCCGCA GCCCGCACAA 840 GCCCAGCTCT GTGCGAACCA CCAATCGCCA CACCGCGCTC TGGGGCCCAC AGCCAGTGGC 900 ACCCTCTCCC GGTGGGCGAC TCCCACCAGC TCCCAGGCTA GGCTCGGAGA ACGGGAAGGC 960 CCACCATCCC TGGGACCACA GGCCAGGTAC ACGGCCACTG GAGGCCAGCA GGCCCTGCGT 1020 GCAGACTGCC TTCCGTGTCC AGAGGTGTGG CTGCTGGAGG CAGTGCCGCC TCCATGAGAC 1080 TCTGTCACAG CAGCAGCCAG GCGGGGGATG GGAGGGGCAT CAATAATTCA CACACAACAG 1140 GGCGACGGGG GAGGAGGGGG TGGGAGACTG CTGGAGCCAC GGCCCACCAT GGCCAGGGAG 1200 GCGTGGACAG TAGGGCTATG GGCTGTGGTC TGGGGGTGCT GACCCTGCTC TGAATTTGAG 1260 GCGTGCACCT CCCCAGGACT GGCCCCCTGC CTGCTTTGAC AAAGGCCAGC GCCCAGGCTG 1320 TGTTTACACG ATGCGTAGTT CCAAGGAGCA CCAGGCTCAG GGCAGGCTGC CCAGCTCTTC 1380 CTCCAGAAAG GCAGGAGGGG TGCAGGGGTC AAATGGGGGA CACTAGGACC CTACCATCCG 1440 GGTGATGGGG CCACACGGGG CACCTGCATT CTCCACGTGG CCCTCAGGCC CCAGCTGCCT 1500 GCACAGCTGC CCTCCTGAGC GCCCAGCTCT GTCCCTGTGG TTCACACAGC CTGGCCCGGC 1560 CCCAGCCACG GAGCAGGGAG CCCATGCCCC CCATCTGGGT GCCACACTTG CCCCCTGATT 1620 TGCAGCCCCG GGGCGCCAGT TCCTCTACCC CCACAGCATG CGCCTCCTCT GCGTGTGCCC 1680 CTCAGTGCCC GGGCAGTGGG CGTTCCTGCT GAAACTCTGG TCACTCTTTG CTTAGGCAGG 1740 TGCCAATTTA GGCCCTCACA GTCGGGAGCA GCACTGTCCG ACAGAAACAG AGTGGGAGCC 1800 GCATGAGGGA TTTGAGTGCC CTAGTACCCA CATTTTAAAA AGTAATAAAG AAACAGGTGA 1860 AATCAATTTT AATAATCTAC 1880
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