Tag | Content |
---|
EnhancerAtlas ID | HS174-03749 |
Organism | Homo sapiens |
Tissue/cell | SK-MEL-5 |
Coordinate | chr20:30262340-30263870 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF2 | MA0051.1 | chr20:30262881-30262899 | GGAAAGTGAAACCCTTCC | + | 7.54 | ZNF263 | MA0528.1 | chr20:30263725-30263746 | CTCTCCTCCTCCACCTCCTCC | - | 8.54 | ZNF263 | MA0528.1 | chr20:30263728-30263749 | TCCTCCTCCACCTCCTCCCCC | - | 8.97 |
|
| Number of super-enhancer constituents: 49 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30261809-30264949 | Aorta | SE_03156 | chr20:30261419-30265068 | Brain_Angular_Gyrus | SE_03894 | chr20:30259899-30271467 | Brain_Anterior_Caudate | SE_04818 | chr20:30251012-30278616 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30250994-30271647 | Brain_Hippocampus_Middle | SE_06739 | chr20:30256527-30267510 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30256426-30271516 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30262676-30264213 | Brain_Mid_Frontal_Lobe | SE_12541 | chr20:30262820-30263673 | CD34_adult | SE_12738 | chr20:30262699-30263257 | CD34_fetal | SE_12738 | chr20:30263321-30263650 | CD34_fetal | SE_13448 | chr20:30259763-30266214 | CD34_Primary_RO01536 | SE_14426 | chr20:30257012-30271334 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30261088-30269159 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30261219-30264993 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30260085-30265113 | CD56 | SE_20764 | chr20:30261115-30270147 | CD8_Memory_7pool | SE_22440 | chr20:30260105-30271391 | CD8_primiary | SE_25330 | chr20:30259962-30278833 | DND41 | SE_28698 | chr20:30262664-30263525 | Fetal_Intestine_Large | SE_30903 | chr20:30261089-30265103 | Fetal_Thymus | SE_31430 | chr20:30261865-30265038 | Gastric | SE_34309 | chr20:30262490-30264853 | HCT-116 | SE_36989 | chr20:30262337-30265046 | HSMMtube | SE_39443 | chr20:30261311-30264932 | Jurkat | SE_39853 | chr20:30260148-30264978 | K562 | SE_40644 | chr20:30261776-30265010 | Left_Ventricle | SE_41648 | chr20:30262737-30263764 | LNCaP | SE_42121 | chr20:30261312-30265122 | Lung | SE_43515 | chr20:30261582-30265038 | MM1S | SE_45708 | chr20:30261712-30267501 | Osteoblasts | SE_47264 | chr20:30261487-30270363 | Panc1 | SE_48182 | chr20:30261855-30264471 | Psoas_Muscle | SE_49346 | chr20:30261840-30264952 | Right_Atrium | SE_49886 | chr20:30261073-30265055 | RPMI-8402 | SE_50155 | chr20:30261479-30264986 | Sigmoid_Colon | SE_51884 | chr20:30262674-30264258 | Skeletal_Muscle_Myoblast | SE_52373 | chr20:30261708-30265016 | Small_Intestine | SE_53471 | chr20:30261285-30265111 | Spleen | SE_55108 | chr20:30261709-30264877 | Thymus | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_63683 | chr20:30262660-30265047 | HSMM | SE_65412 | chr20:30262295-30264865 | Pancreatic_islets | SE_66334 | chr20:30261311-30264932 | Jurkat | SE_67146 | chr20:30261582-30265038 | MM1S |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I031672 | chr20 | 30259913 | 30270236 |
|
Enhancer Sequence | TAACCTGAGG CTCAGAGATA CTGAGACCTA GCTAAAGTGG ATAAGTGGCA GCTAGCTGTG 60 ATGGCTCACA CCTGTAATCC CAGCATCTTT GAGAGTTCAA GGTGGGCAGA CTGTTTGAGC 120 TCAGGAGTTC GAGACCAGCC AGGGCAATAT GGTGGGACCC CCATCTCTAT AAGAAAAATC 180 TTAGAAATTT AGCTGAGTGT GTTGGCATGC ACCTATAGTC CCAGCTACTC AGGAGACTGA 240 AGTGGGAGAA TTGCTTGAGG CTGGGAGGTT GAAACTGCAG TGAGCTGTGA CAGCACCACT 300 GCACTCCAGC CAGGGCGACA GAATGAGACC CCGTCTCAAA AAAAAAAAAA AAAAAAGGGA 360 AGCCATTTTT AAGCCCCAGT ATGTTTGGCA GCAAACCCCA TATTCTGAGC CAGGGCCATG 420 GCCCTGGGTC TGTCAAGGAG GGTAAAGTAG CCTGAGGCCA TCAGCTGAAT GAATAAGCAC 480 TGGCTCCTGC CAGCTGAGGG GAACTGGTGC CACAGGAAAA GGATGTGACG AAGACCAGGA 540 GGGAAAGTGA AACCCTTCCG TCCTGGCTTC AGTGAGGAAC AAGCATGCCT GTGCCAGACG 600 AACCCTTCCT TCCTCTTGGG TGACTCTGGA GGGCCCAGGC CCATTGCTTC CTTCCTGCTT 660 GGTTATTTCA GGAAAGAGGT AGGTGGAGAA GAGGAAGAGG CTACTAGCAG CCAGGAAAAG 720 TGCCAGGGAC ACCAGAACTG TACCTTGTTC TGTCCTTCTC ACATCCCTGC ATTGGCAGGC 780 TGTGAGTCAC CTGCAGAGTC ACCTTATGCT CCTGGCCTCA GTTTCCCTGA GGGAGAGGCT 840 GATAAATGTG TGCTGAATAG ACAAACATGG CCTTGCTAGA AGATCGCTGG GAGATGGTAG 900 GAAGGGGGTA GGGCAAACGG AGAGGCCTTA TCACTCTTTT GGCAGGGAGT TGCAGGCGGA 960 GACTCGGAAG AAGTGAGGTT TGTGGTTGGA ATCCACTTCC TCTGGTTTTC CCAGGGGAGC 1020 TGTTGGCTCC CGAGATGTGA GAAGAACATG GCCTTTCTCC TCTCCCCCAC GGAAACATAG 1080 GCCTGGAGGT GGGCAACTTG GAGAAGCAGC TCAGTGGAGG CAGGGCAAAG AGAGGGGTGG 1140 CAAGACTGTG TTGGGGTCAA CACCTCAGTC CAGCCGGCCC AGGTATGGGT GGGTGCCACA 1200 GCAAGCCTTT TGGCTTCTGA GCCTCAGTTT CTCCTGCCTT GACCTCCCTA GCAGTAGTGG 1260 TGAGATCAGG GGGTGTCATA GAGGGCTCAA GCCATCTGGG CTATAGGGAA TATTTGGTGG 1320 TATCCTCACA ACAAACTTCA TGTTTATCTT CCTCCAACTC TGACCTGTTC AATTCAGCTG 1380 CCAGCCTCTC CTCCTCCACC TCCTCCCCCA CCATTAGTTC TAAGAAGCTG TGCCTGACAG 1440 ATGCACTTGC ATTTCTCAGA AAAGGAAGCG GTTGTGCCGG GAGGAGATAA CACCTCCGCT 1500 GGGGAATCGA GAAAGCTATC AGGCCTAGCA 1530
|