Tag | Content |
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EnhancerAtlas ID | HS174-03748 |
Organism | Homo sapiens |
Tissue/cell | SK-MEL-5 |
Coordinate | chr20:30253890-30256210 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA | MA0071.1 | chr20:30254891-30254901 | ATCAAGGTCA | + | 6.02 | SPI1 | MA0080.4 | chr20:30255263-30255277 | AAAAAAAGGAAGTA | + | 6.3 | SPIC | MA0687.1 | chr20:30255263-30255277 | AAAAAAAGGAAGTA | + | 6.79 |
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| Number of super-enhancer constituents: 50 | ID | Coordinate | Tissue/cell |
SE_01656 | chr20:30251593-30255062 | Aorta | SE_01656 | chr20:30255172-30256252 | Aorta | SE_03156 | chr20:30251628-30255068 | Brain_Angular_Gyrus | SE_03156 | chr20:30255149-30256302 | Brain_Angular_Gyrus | SE_03894 | chr20:30251234-30256284 | Brain_Anterior_Caudate | SE_04818 | chr20:30251012-30278616 | Brain_Cingulate_Gyrus | SE_05813 | chr20:30250994-30271647 | Brain_Hippocampus_Middle | SE_06739 | chr20:30251224-30256437 | Brain_Hippocampus_Middle_150 | SE_07749 | chr20:30249036-30256401 | Brain_Inferior_Temporal_Lobe | SE_08789 | chr20:30254242-30254774 | Brain_Mid_Frontal_Lobe | SE_08789 | chr20:30255411-30256162 | Brain_Mid_Frontal_Lobe | SE_13448 | chr20:30254128-30255176 | CD34_Primary_RO01536 | SE_13448 | chr20:30255335-30256360 | CD34_Primary_RO01536 | SE_14426 | chr20:30251256-30256364 | CD4_Memory_Primary_7pool | SE_18483 | chr20:30253825-30255097 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19226 | chr20:30254046-30255079 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20456 | chr20:30251268-30256502 | CD56 | SE_20764 | chr20:30252184-30256407 | CD8_Memory_7pool | SE_22440 | chr20:30251269-30256411 | CD8_primiary | SE_25330 | chr20:30251098-30256224 | DND41 | SE_30903 | chr20:30251126-30256247 | Fetal_Thymus | SE_31430 | chr20:30251145-30256293 | Gastric | SE_34309 | chr20:30251340-30255178 | HCT-116 | SE_34309 | chr20:30255280-30256381 | HCT-116 | SE_39443 | chr20:30253916-30254474 | Jurkat | SE_39853 | chr20:30253476-30255101 | K562 | SE_39853 | chr20:30255212-30256259 | K562 | SE_40644 | chr20:30251193-30256255 | Left_Ventricle | SE_41648 | chr20:30251726-30254586 | LNCaP | SE_41648 | chr20:30255535-30256127 | LNCaP | SE_42121 | chr20:30251496-30256350 | Lung | SE_47264 | chr20:30251190-30256311 | Panc1 | SE_48182 | chr20:30252376-30255098 | Psoas_Muscle | SE_48182 | chr20:30255162-30256349 | Psoas_Muscle | SE_49346 | chr20:30251223-30255077 | Right_Atrium | SE_49346 | chr20:30255165-30256336 | Right_Atrium | SE_50155 | chr20:30251132-30255104 | Sigmoid_Colon | SE_50155 | chr20:30255128-30256246 | Sigmoid_Colon | SE_52373 | chr20:30251406-30255074 | Small_Intestine | SE_52373 | chr20:30255135-30256220 | Small_Intestine | SE_53471 | chr20:30253670-30256253 | Spleen | SE_55108 | chr20:30254034-30255039 | Thymus | SE_57201 | chr20:30254084-30255003 | VACO_400 | SE_58612 | chr20:30249012-30312162 | Ly1 | SE_59155 | chr20:30248900-30312556 | Ly3 | SE_61228 | chr20:30249013-30312452 | HBL1 | SE_61455 | chr20:30248898-30312277 | Toledo | SE_62770 | chr20:30248811-30312352 | Tonsil | SE_65412 | chr20:30251623-30256414 | Pancreatic_islets | SE_66334 | chr20:30253916-30254474 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 30254323 | 30254942 | chr20 | 30254400 | 30254942 | chr20 | 30255195 | 30256000 |
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| Number: 1 | ID | Chromosome | Start | End |
GH20I031661 | chr20 | 30248961 | 30259586 |
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Enhancer Sequence | TGCAGGGAGA GAGAAGGAAG GTGCAGTTTT AGTCCTCAGA GAGTGATGTA GGTGGGTGGG 60 GAAAGGGGCC ATCTGCATGC TATGGCCTTG GTGATGTGAA AAACTGTAGC CATCTGTGCC 120 CACTCTGGGC CAGGTAAAGG GCTAAGGGTG GTCCTCTTTC TTGACCCTCC ATTGGTGATA 180 ATCAAACCAT GTTACTGCTG AGAAACAGGT AGAGAGGAGG AAAGTGCCCT GTCTGAGGTA 240 AGTCAAGAAG TAGCACTTAC TCCAGAATCC AAGGTGGGAA CGAGATGGGC AGGGTCAGGG 300 AACTGATGGA AGCCAGGTGG CTGGAGCAGA GTGCAGGAGA GGAGGGCATG GGGGAGATGA 360 TGGTGCAGGG GTGAGCAAGA GCCAGACCAT ACGTGGCCTG GAAGCCGCAA GGAGCCTAGA 420 GTTGAGTCTG AGGGTAGTGT GGAGTGTGGA GCCACTAGGC CTCAGATTTT CTACTGCTGC 480 ACCAGAGGGA GGGATAAGGA AGCCCAGGGC TAAATCCCCA GGGTCATTTG AGGCCAATTC 540 AGGGGTAGAA TGGGTCCTGG GACTTCAGCC AGAGGCTCCT CCCTCTGGAG GGAGCCTCTG 600 GTGGGCAGGT TGGTGACAAG AAGAGCAGGG CAGAGGAGAG AGGGTAACAA TGATGCAGGA 660 CTGACAGGCC TCCATCACGG GGTCTGTGAG GCCTTGTCCC GGACATCCTC CACTGCAGGG 720 GGTGTGACTC TGGGCCCAGG AGGTTGTGAT CAACAGCCCT CTGCCCTGAA TCTAAGTCAG 780 AAGGGAAGCA CATGACAGGG GGAAGGAGGA GCTGTGGGCT AAATTACCCA GCCCAGGGTG 840 CAGCAGCCTG TGGGGCAGGG AGAAGGACGC TTAGAACATA ACTTTTATGA GTAAGCGTAG 900 TACCCAATTT GTCCTTTAAT CCTCCCAACA ATTCTGCAAT GCAGGCTGTC TCTCCCCATT 960 TACAGGCCAA GAAGCTGTGC CTCTGAGGGT CCAGGGACTG GATCAAGGTC ACCCAGCTGT 1020 GTCAGTGGTG GAGCCAGAAT CTAAAACTGG CATCTGGCAC CTAGAAATAT GTAAGAAAGA 1080 AGTAAGTTCC AGGCTGGGTG CGGTGGCTCA TGCCTATAAT CCCAGCACTT TGGGAGGCTG 1140 AGGTGGGTGG ATTGCCTGAG GTCAGGAGTT CGAGACCAGC CTGGCCAACA TGGTGAAACC 1200 CTGTCTCTAC TAAAAATACA AAAATTAGCC GGGTGTGGTG GCACGCACCT GTAATCCCAG 1260 TTACTCAGGA GGCTGAGGCA CGAGAATTGT TTGAACCCGG GAGACGGAGG TTGCAGTGAG 1320 CAGAAATCGC ACCACAGCAC TCCAGTCTGG GTGACAGAGA CTCCGTTCAA AAAAAAAAAA 1380 GGAAGTACCA TAGTACCGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTAAA ATGAATGAGT 1440 TACTGGCTGG TTCTTGCCTC TCTACCAAGA CCTCTGCCAC ACTGGGCCTA CATTTCCAAC 1500 CAGTCCCAAA TGGCCGAGTG GCTGCTCCCT CAAGACAGGC ATGCCATCTC CAGTTGGCCT 1560 CAGGTCTCAC CTATCAATTT GCTCACTTGT GACCCCTGCC GTGGCCCACT TCCAGTCTTG 1620 ACAACCCCCT CAGTCCATGC TCCACACAGA GCTTTCTAAG AACACTGGAA GCCCTCCAGC 1680 AGCATTCTCC TGCACTTAGA AGGGCAGCAT CATTTATTTT TGTATCCCTG GTACCTAGCA 1740 AAATGCCATG TGCACTGAGC TGCTAATTTG ACTGAAGGAA TCCTCAACAT TAAGGCAGTA 1800 GAGAGCAGTG ACCCATGAAT CTCAGCCCTT GCAGAAGCAC ACTCCATTCA GTCACTCCAA 1860 GTTCTCAACC TTCCCAGGGC TTCCATCACA CCTGAAATAA AGTCCCCACT CCTTACTCTG 1920 GCCAGCAAGG TCTAGTGGGA TCTGGCTCCA ACACTTTCTG GCCTCCTCCC CACCCCTGTC 1980 CCCTGAACTT CACTCCAGTC CCACTGGCCT CCTTGCTGTT CCTCCAACGT CTCCTGCCGC 2040 AGGAGTCTGC TGTTCCTGCT TGCCTGGAGC ACCTGACCCC AGGTCGTCGC CTGCCTCACT 2100 CCCTCATTTC ACAACCATGA CTCCCCTCAA ATGTCACCTC CTAGGGGAGG CCTTCCCTGA 2160 CTGCCTTGTC TAAAACAGTA CACCACCCCC GTCTCTCTCT GCCTGTCCCC TTACCTTCCT 2220 TGATTTTTCT TCTCAGTTTT TTTTTTTTTT GAGACACAGT TTTATTCTGT CCCCCAGGCT 2280 GGAGTGCAGT GGCACAAACT GGGCTCACAG CAACCTTTGC 2320
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