| Tag | Content |
|---|
EnhancerAtlas ID | HS173-13975 |
Organism | Homo sapiens |
Tissue/cell | SH-SY5Y |
Coordinate | chr8:28232180-28233470 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RUNX1 | MA0002.2 | chr8:28232391-28232402 | GTCTGTGGTTT | + | 6.62 | | SP2 | MA0516.2 | chr8:28233004-28233021 | TTGGGGGTGGGGCTTAT | - | 6.65 | | SPIC | MA0687.1 | chr8:28232228-28232242 | AAAAAGAGAAAGTA | + | 6.13 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_00229 | chr8:28230493-28232963 | Adipose_Nuclei | | SE_10881 | chr8:28219708-28248222 | CD20 | | SE_14002 | chr8:28232916-28233714 | CD34_Primary_RO01536 | | SE_17678 | chr8:28232604-28233719 | CD4p_CD25-_CD45RAp_Naive | | SE_27701 | chr8:28228852-28234030 | Fetal_Intestine | | SE_28577 | chr8:28220748-28235445 | Fetal_Intestine_Large | | SE_30513 | chr8:28231917-28232782 | Fetal_Muscle | | SE_40988 | chr8:28232170-28233589 | Left_Ventricle | | SE_42550 | chr8:28232866-28233538 | Lung | | SE_48797 | chr8:28232074-28232666 | Right_Atrium | | SE_48797 | chr8:28233068-28233629 | Right_Atrium | | SE_53710 | chr8:28232915-28233595 | Spleen | | SE_55734 | chr8:28231312-28233651 | u87 | | SE_58644 | chr8:28219872-28277477 | Ly1 | | SE_59813 | chr8:28219869-28277603 | Ly4 | | SE_61002 | chr8:28174118-28277761 | HBL1 | | SE_61739 | chr8:28219999-28279573 | Toledo | | SE_62508 | chr8:28220381-28270893 | Tonsil | | SE_65386 | chr8:28233058-28234101 | Pancreatic_islets | | SE_67509 | chr8:28231312-28233651 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH08I028363 | chr8 | 28220521 | 28234313 |
|
Enhancer Sequence | CTCTGTGGAT TGTTAAATTT ATATGCTAGT TCAAGGAAAA GGCAGGGAAA AAAGAGAAAG 60
TATGTCAATG GGACTTCTGA TCATCCAAAG GGATGTCCTA GGAGTAATTC CAGTTCTTCC 120
AACCCAGCAC TGCAGCACTC CAACACAACA CACACGTTCC CTAATAAGCC AGCCCTTGCC 180
CAATCACACT TCCTCCATAC CAGGCCTAGC TGTCTGTGGT TTTGACTCTT TCAGATGGGA 240
ATCAGGATTC CTAATATAAA TCCAAATCCC CTGAGCTAAT GAGAAAAAAG AATCTGAACA 300
TCCCATTGCA CAAACTCTAA AACATTATTA TTCACTCACT GGGGACTCCT AACCACATAG 360
GTTACTGCTT TTTAAACAGA CACGCACCCC CTGCCTCCTC CTCAAAGCAC TACCTATAGA 420
GTCCTTAGAA ATACAAAATT GGCTGTGCAC AGGTAGCTCA TGCCTGTAAT CCCAGCACTT 480
TGGGAGGCCA AGGTGGGAGA ATCACTTAAG GCCAGGAGTT TGAGATCAGA CTGAGCAACA 540
CAGTGAGACC CTGTCTCTAA AAAAAATTTA AAAATTAGCC GGGTGTGGTG GCACCTACCT 600
GTGGTCCCAA CTGCTTGGGA GGCTGAGGTA GGAGAATGGC TTGAGCCTGG GGAAGTCAAG 660
GCTGCAGTGA GCTGTGATTG TGCCACTGCA CTCCAGCCTA GGAAACAGTG CAAGACTGTC 720
TAAAAAAAAA AAAAAAAGAG AGAGAGAGAC AAAATTATAA TATTTAGAAC CTACTGAGCA 780
AAACTAACTT ATGGCAATAG AAATCAGATT TGTGGTACTT CTGGTTGGGG GTGGGGCTTA 840
TCTGGAAGTG GTCACGAGGA ACTCATCTGG GGTGATGGAA ATGTTCTGTC TCCATACGTA 900
TGTGTCGAAA CTGATTAAAC AGCACACTTA AGATCTGTGC TGTATGTAAA TTACACCTCA 960
ATTTAAAAAA GAACTCCTCA CACACAGTTT CTCTCCCGGC TGCAGCAGAA CTCTGAGCTG 1020
TCCTATCAGA CGTTGGAAAT CTCTGTTGTG CTATGCAAGG AGCATGAGTA CCATGGCGAC 1080
AGTCACCATA AAAATAGATA ACAAGATTAA AATGGACACA GGACACATGA ATTTAAGAAC 1140
AGCACACCAA GAGCAATTCA TTTTCAGCAG AAGAAAAATA GAAAGAGGAG AGGGAGTTTT 1200
CAATTCCTCC GGCACTTTGA CAAGCAGCCA CTGACTGAAT GCGGGTGTTT TTACTAAGAG 1260
AGTTGTATAT GGCTTCCTGA TACTCAAAGG 1290
|
