Tag | Content |
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EnhancerAtlas ID | HS173-06976 |
Organism | Homo sapiens |
Tissue/cell | SH-SY5Y |
Coordinate | chr19:39181930-39184940 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr19:39184056-39184074 | GGAAGGCAGGAAGAAAAG | + | 6.98 | EWSR1-FLI1 | MA0149.1 | chr19:39184712-39184730 | ACATCCTTCCTTCCTCCC | - | 7.11 | Foxd3 | MA0041.1 | chr19:39182542-39182554 | AAACAAACAAAC | - | 6.32 | Foxd3 | MA0041.1 | chr19:39182546-39182558 | AAACAAACAAAC | - | 6.32 | Foxd3 | MA0041.1 | chr19:39184184-39184196 | GAATGTTTGTTT | + | 7.22 | IRF9 | MA0653.1 | chr19:39182019-39182034 | AACAAAAGTGAAACT | + | 6.15 | RUNX1 | MA0002.2 | chr19:39184668-39184679 | CTCTGTGGTTT | + | 6.14 |
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| Number of super-enhancer constituents: 67 | ID | Coordinate | Tissue/cell |
SE_00117 | chr19:39182049-39186979 | Adipose_Nuclei | SE_00865 | chr19:39182076-39185083 | Adrenal_Gland | SE_01543 | chr19:39181993-39190228 | Aorta | SE_02408 | chr19:39181342-39185560 | Astrocytes | SE_02946 | chr19:39182825-39183824 | Bladder | SE_03166 | chr19:39182673-39184911 | Brain_Angular_Gyrus | SE_03903 | chr19:39182386-39185093 | Brain_Anterior_Caudate | SE_04868 | chr19:39182350-39185068 | Brain_Cingulate_Gyrus | SE_05805 | chr19:39182078-39206004 | Brain_Hippocampus_Middle | SE_06803 | chr19:39182428-39185106 | Brain_Hippocampus_Middle_150 | SE_07777 | chr19:39182077-39185225 | Brain_Inferior_Temporal_Lobe | SE_08790 | chr19:39183752-39184145 | Brain_Mid_Frontal_Lobe | SE_08790 | chr19:39184171-39184496 | Brain_Mid_Frontal_Lobe | SE_09404 | chr19:39182333-39191485 | CD14 | SE_13194 | chr19:39183611-39184401 | CD34_Primary_RO01480 | SE_13490 | chr19:39182874-39185111 | CD34_Primary_RO01536 | SE_14624 | chr19:39183423-39184854 | CD4_Memory_Primary_7pool | SE_19537 | chr19:39182491-39185050 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20249 | chr19:39181278-39188425 | CD56 | SE_20865 | chr19:39183372-39185109 | CD8_Memory_7pool | SE_22709 | chr19:39182642-39186831 | CD8_primiary | SE_23062 | chr19:39182731-39184965 | Colon_Crypt_1 | SE_23732 | chr19:39183074-39184903 | Colon_Crypt_2 | SE_24739 | chr19:39182754-39183899 | Colon_Crypt_3 | SE_24739 | chr19:39183955-39185064 | Colon_Crypt_3 | SE_25779 | chr19:39180965-39189795 | Duodenum_Smooth_Muscle | SE_26525 | chr19:39180697-39193852 | Esophagus | SE_27614 | chr19:39180632-39201469 | Fetal_Intestine | SE_28533 | chr19:39164445-39201888 | Fetal_Intestine_Large | SE_29583 | chr19:39181947-39185064 | Fetal_Muscle | SE_31384 | chr19:39182626-39185071 | Gastric | SE_34299 | chr19:39180509-39186508 | HCT-116 | SE_34681 | chr19:39184216-39184943 | HeLa | SE_35430 | chr19:39183365-39184979 | HepG2 | SE_35812 | chr19:39168616-39191950 | HMEC | SE_36926 | chr19:39172838-39186932 | HSMMtube | SE_38012 | chr19:39181151-39186650 | HUVEC | SE_38896 | chr19:39182466-39184917 | IMR90 | SE_40594 | chr19:39180727-39193965 | Left_Ventricle | SE_42097 | chr19:39180674-39193834 | Lung | SE_44161 | chr19:39181143-39185634 | NHDF-Ad | SE_44797 | chr19:39181919-39184905 | NHLF | SE_45660 | chr19:39180876-39186673 | Osteoblasts | SE_46686 | chr19:39182759-39183893 | Ovary | SE_46686 | chr19:39184055-39184894 | Ovary | SE_47114 | chr19:39164477-39226374 | Panc1 | SE_47461 | chr19:39182677-39185005 | Pancreas | SE_48075 | chr19:39180646-39186770 | Psoas_Muscle | SE_48555 | chr19:39181946-39182365 | Right_Atrium | SE_48555 | chr19:39182415-39185026 | Right_Atrium | SE_49449 | chr19:39182454-39184953 | Right_Ventricle | SE_50056 | chr19:39182445-39193963 | Sigmoid_Colon | SE_51136 | chr19:39181521-39186773 | Skeletal_Muscle | SE_51705 | chr19:39182066-39185548 | Skeletal_Muscle_Myoblast | SE_52339 | chr19:39180899-39193971 | Small_Intestine | SE_53291 | chr19:39181227-39190272 | Spleen | SE_54534 | chr19:39180651-39189737 | Stomach_Smooth_Muscle | SE_56725 | chr19:39181511-39182336 | VACO_400 | SE_56725 | chr19:39182441-39185071 | VACO_400 | SE_57359 | chr19:39183289-39184322 | VACO_503 | SE_57359 | chr19:39184333-39185048 | VACO_503 | SE_58038 | chr19:39182547-39184962 | VACO_9m | SE_62811 | chr19:39125155-39186863 | Tonsil | SE_63494 | chr19:39182024-39185548 | HSMM | SE_64225 | chr19:39182411-39185099 | NHEK | SE_65266 | chr19:39181937-39187543 | Pancreatic_islets | SE_68725 | chr19:39182386-39185068 | H9 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr19 | 39182594 | 39182977 | chr19 | 39182037 | 39182274 | chr19 | 39184148 | 39184440 | chr19 | 39182491 | 39184907 | chr19 | 39181948 | 39182010 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I038673 | chr19 | 39164536 | 39206516 |
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Enhancer Sequence | CTCGGGAGGC TGAGGCCAGA GAATAGCTTG AACTCAGGAG GCAGAAGTTG CGTTGAGCTG 60 AGATCATGCC ATTGCACTCC AGCCTGGGCA ACAAAAGTGA AACTCCGTCT CAAAAAAAAA 120 AAAACAAAAA AAACAAAAAA AAAAACCCAA CAACGCAGAG TGGAGTGATA GCCTAGGGGA 180 GATGACAGAG TCCAGGAAGG CCTCCTGGGT TGCTGACATT TGAGGCAAGT CCTGAGTGAT 240 GAGACAAAAC CAGCTCTATA AAGAGCTAGA CGAAAGTCTT AGACCAGTAT TTCTCATGAG 300 GAGGAGACAG CACTCCAAAA TCCATCCTTT GGCCTGGCGC GGTGGCTCAC GCCTGTAATC 360 CCAGCACTTT GGGAGGCTGA GGCGGGTGGA TTACCTGAGA TCAGGAGTTC GAGACCAGCC 420 TGGCCAACAT GGCAGAAACC CGTCTCTACT GAAAATATAA AAATTAGCCG GGTGTGATGG 480 TGGGTGCCTG TAATGCCAGC TACTCGGGAG GCTGAGGCAG GAGAATCACT TGAACCCGGG 540 AGGTGGAGGC TGCAGTGAGC CGAGATCATG CCACCGCACT CCAACCTGGC GACACAGCGA 600 GACTCTGTCT CAAAACAAAC AAACAAACAA AATCCGTCCT TTGCAGCAGC AACACGCACG 660 CTTTCTGGCA CCTCAAAGGG GATTGTCCAA GACTGGAACA CTGGCTGCAG GGAGGGGGCC 720 GGGTGCAAAG AGCTGGTTTC TGGGTGGACA CGCAGGACCT TTGGAATGCT CGCTACCCCA 780 CTCAGCAGTA TTTATACCTC TTCTCCAACT GCGAAGTCAG AGCTTTTTCA TGCAGGCTGA 840 GAAAACTCCG AATAAGGCAA CTTCAGGCCA GGACATAAGA CGCATTCCAT ATTTCACTGT 900 AATTGCTTTC AAATTAGGTT ATGTCGTCAT GTAACAGGCA CACACAGTGC ACTTGCTTTG 960 CCCCTGGCTG GGGTTGGGTC CTGGACAGGC TGCCCCGTGT GTCGCTGAAC TGCCGCAGTG 1020 CTAGCCCTGA TTGCCTGGGC AGTAGGGCTG TCTGCGTCCC ACGTTGCTGC ACCCATCTAA 1080 TTTGTGGCTG TGTTATTGTG ACCTGCTCGT TTTCTGTTCT TTCAACCTGC TTCCTGGCTT 1140 TTATCTCCTT CAGAATCTGG TGGCAGTGGA TCTTCAAAAA GTGCTCAGGT GTGCAGTCTC 1200 ACAGGCCAGA GGCTCCACGG GCCCCCTTGC CAGGGCGAGC ATCTCTGCCT GTGCCGCTGG 1260 TAACCCAGAT TCCAGAAGGC TTAGCCGTCT GGCCCTGAAA GCGCCTTTAT AGTTGGTGAT 1320 GAAGCCCATG GGCTGGGGAG CCGTTTCTGC TTTCAGGAAC TGAAAAGATG CCCCAGTGGG 1380 GCTAGGCCTT GCCTGAGGTC TGGCAATAGC CTGCCAGATG GGTGATAAGA AGGCCTACCC 1440 AGGTGATAAG CCTACCCAGG AATAAATAGC TGTACCTCCC CTGTGTCCAA GCCCTGGACA 1500 CCCTTCCCTA GGACCCATGG AAGCAGGAAC CATGGGCAGC GTCAGAGGCC ACAGCAGGCA 1560 AGGTGGAAGT TCAGGAGGTG GGACGGCGCC CTCCCCCTCA AAGCAACTGA TGCCCCAGCG 1620 GAGCGACAAA CCCTACACGG TATTTCAGAG CCAAGGTTTG AAAACTCCCA GGGTGCTAGG 1680 GAGCTCCGTC TGGCCTCCGG GTACCTGGGG TTGGGGCTGG CTGTGGCCAG TTGCAGTCAA 1740 CCCTGAGCCT GGGCAAAATG CATGCAGGCT GGTCCTCCTG GGTGATATCC TGCTAGGCGG 1800 GTGGGCAGTG TACACGGCAG AAGAGGGTTG CGGCATGAGG CAGCAAACGT TTTTTTCTAA 1860 AATCTTGTCA AGCGTGGGGT CCGTGGAATC CACATGTGAG CATCAGCCTG GTGGGTGGGG 1920 AGAGTGAAGC CTGCGATCCA GTCTGGATCA TGTGCTACAC AGTGCAGAGC CGGCATGCTC 1980 ACCCCTCCTG AGGGATCGCT CGAGCCTATT TCTAGGCCCA AAGCGACTTT GCAAGAGACT 2040 CCCTTTATTC TGGGCTTAGT GGAATTCCAG CTTCCAACAG CCATTTCCCT CCACCCCCTT 2100 CAGTTCTGAG AACATGTTTT GTAACAGGAA GGCAGGAAGA AAAGAGAAGG CGAGTTTGTT 2160 CAGCTGGGTC AGCCGCATCC CACCAAGGCC CTTTCTTCCC TCCAGCTCAC CATCGCTCTG 2220 CCCACTGGAA CCACTCGGTT GCCCTGTGTC TGCCGAATGT TTGTTTCTTA ATCAGCGCCC 2280 CAGAGTAGAG AGGGCTTTGC CTCTTCGGGT TGAGGGAGGG AATCATTGAT GAATGGCTCA 2340 TTAAAGCCCA CTGCTGCCAC ATTCCTGGGT GCTTAGGTCA CCTCCTGAAC AATATCCATC 2400 ATTCATTCAC CTACCGCCCC ACATCCTGGC GGCTGGGAGG GGTCCCTGTG ACGCAGGAAG 2460 GACTTTATGA CCAGAGATGC TAGGTCTCCG TCTCCCTCCT GCAGCCCACA GTGACAAAGC 2520 AGAAACTGCT CTTGGGGCCC CCTGAAGCCC GCCTTAGCTG GGTCACCATG GGCCTTGGCA 2580 CACGGAGGGG TGACAGTGGA TCCCAACTCA ACTGACAAGC TTGCCTTTCT CTGTTCTTCC 2640 ACCCCCCTTC CCCGCACTCA CACCCTGTGC TATTTTAGCA ACCAGAGAAG CCTCTTTAAT 2700 AGGCTGCCCG TGTGCAGGGG CAAGCTCTGA AGCCTCCTCT CTGTGGTTTG GTTCACATGT 2760 GTTCTCAAAG ACAGATGAGT CCACATCCTT CCTTCCTCCC TAGATAGGTC AAGGGCTGGG 2820 TGCAGGCTGC CTTCACAGGA GGGCCAGGGA CAGGCTGGGA GGAGCGGGGC CACCTTTTGC 2880 GAAGCGGGTG ATCTGCTGGG GCGTTGCTCT GCCTGCCTGC CTTGTTCTCT GAGTTTACCT 2940 CTAGCTTGGG GACCAAGGGT GGGCTGGGGC CTTCTTTTTT TTTTTTTGAA ACCGAGTCTT 3000 ACTCTGTCTC 3010
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