Tag | Content |
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EnhancerAtlas ID | HS173-01475 |
Organism | Homo sapiens |
Tissue/cell | SH-SY5Y |
Coordinate | chr1:234879080-234880620 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:234880447-234880468 | TTTTTCTTTTTCTTTTTTTTT | + | 6.09 | IRF1 | MA0050.2 | chr1:234880431-234880452 | CATTTCTTTTTCTTTCTTTTT | + | 6.12 | IRF1 | MA0050.2 | chr1:234880437-234880458 | TTTTTCTTTCTTTTTCTTTTT | + | 7.26 |
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| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_02487 | chr1:234879801-234880442 | Astrocytes | SE_03441 | chr1:234879137-234880436 | Brain_Angular_Gyrus | SE_04206 | chr1:234878839-234880625 | Brain_Anterior_Caudate | SE_05210 | chr1:234878806-234880467 | Brain_Cingulate_Gyrus | SE_06159 | chr1:234878714-234880868 | Brain_Hippocampus_Middle | SE_07154 | chr1:234878956-234880633 | Brain_Hippocampus_Middle_150 | SE_08108 | chr1:234878362-234880528 | Brain_Inferior_Temporal_Lobe | SE_38136 | chr1:234878598-234881939 | HUVEC | SE_45839 | chr1:234878982-234880519 | Osteoblasts | SE_47205 | chr1:234878039-234889090 | Panc1 | SE_61992 | chr1:234850904-234881356 | Toledo | SE_63435 | chr1:234845326-234887436 | NCI-H69 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I234743 | chr1 | 234878795 | 234883249 |
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Enhancer Sequence | GCTTAGGACA TGGACAGGGG CTCTCACAGG CTCTTAAAGA ACCAGGAAGG GTACTGGGTG 60 TCCGATCACA CACACACACA CACACACACA CACACTCTAC TTGTGTATCA GATGTCCACT 120 GACATTGGCC ACATTACTGC TAGATTTGTG AACCAATTAA AAGCTGTTCC ATTTGATAAA 180 CATTACATGT ATATGCATTC TATACTGCAG TAATAATTAT CTCTTTGCAT ATCTGTTTCC 240 TCACAAGAGC TTGAGTCCCG TCAAGACAAG GATAAGCCCT TCCACTATAG AGCCACAGCA 300 GGAAGCCCTC AGCCTGGTAC ACAGTGGGCA TCCAATAAAC CTGAATGGAC AGAATGAGGA 360 AACTGAGACA CAGCTCTTGT GTTCAGGGCC AGTCTGAGAC CAAATCTGGA AACAAACTCG 420 GAATTTCCAA TTCCAGGCTA AGTGCTTTTG CCAGAGGGAA GATGAAAGCG TATGTTTCAA 480 GCTCTGCAAG ATCCACAGAG AATTTTTTCT AAGCTCCTCT CTAAGAAGGC GCCAAGGAGC 540 TCGATGTCTT TTTCCCCTGG ACCCAAGCTT TTATGCCTCT GCCCAGTGGA TGCGGCTTCT 600 CCGCCGCAAG GAGTGCAGCT CCCTCCTCAT CCGTTGGGAA CATAACAGCC GAAGCTGCTC 660 CCCCACAAGC TGCAGGATAA ATGTCAAGTG AGGAGGGAAT GCTGCTGCCT GGGTAGACTG 720 CATTCTACTC ATTCTGCTGA GGGTCATGCT TTGAAAATAT CTCTAATTTT GTTTTCATAG 780 CTTGTTAACC TTTTCCTTCC CAAAACAATA CCCATGTTTG TTTTGGCACC ACTCGCGTCC 840 TGCATACTGA GGACGGGTCT GAGTTGGATG CACAAAAGCA TTTTTCCCTT AATCTCATTA 900 CAAGGGCTCC TCAGTCTTTA ATTCTTCCCA GGGCTCACTT GCTGTGAAGT GATTTCCTCT 960 TGGAATCCGT TTCTCTTTGT GAAGCTGGGA GAGCAAGTCT GTTTGGTTTT GTAGGGATGT 1020 GGGGAAGGAA AGCAAAGACA AAGGCAAAAA CAAGTGGTGC TGGGGTGCCC TGGAAGTTCC 1080 TAAGAGCAAA TGGACCCACT CTGAAATGTC TGCAGCTGAG ACCAGTGATA CTCGAATTCC 1140 AGTTTGAATG AGGATCACGC GCTGAGGTCA CGTACTTACT GCTGTCTCCT GTCTACCTGA 1200 GGTTTACAAA ATGTGTGAAT AAAGGCGCCA GTGCTTTGAC AGCTGGTCTT GCTCATGCGT 1260 TTAGAGAGCA TCTTATTTCA TCCTTTTTGC CCCTCGAATG TTGCGCATCT GACAGTTTGA 1320 CCACCCTGCC TGGACTCTTA CATGCATGTG GCATTTCTTT TTCTTTCTTT TTCTTTTTCT 1380 TTTTTTTTTT TTTTGAGACA GAGTCTCGCT CTGTCACCCA GGCTGGAGTG CAGTGGTGCG 1440 TCTCGGCTCA CTGAAAGCTC CACCTCCCGG GTTCAAGCGA TTCTCCTGCC TCAGCCTCCC 1500 GAGTAGCTGG GACTACAGGC TTATGCCACC ACACCCGGCT 1540
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