EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS173-01337 
Organism
Homo sapiens 
Tissue/cell
SH-SY5Y 
Coordinate
chr1:223900580-223902290 
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs373214284chr1223900595hg19
TF binding sites/motifs
Number: 2             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
PRDM1MA0508.2chr1:223902182-223902192GTGAAAGTGA-6.02
ZNF263MA0528.1chr1:223900924-223900945GGAGCTGGAAGGGAAGGGGAA+6.37
Number of super-enhancer constituents: 38             
IDCoordinateTissue/cell
SE_00224chr1:223891886-223912166Adipose_Nuclei
SE_01908chr1:223899434-223901751Aorta
SE_02306chr1:223899487-223903687Astrocytes
SE_04026chr1:223899460-223901964Brain_Anterior_Caudate
SE_05036chr1:223899387-223902276Brain_Cingulate_Gyrus
SE_05972chr1:223899184-223905867Brain_Hippocampus_Middle
SE_07996chr1:223899335-223902248Brain_Inferior_Temporal_Lobe
SE_09681chr1:223899395-223907924CD14
SE_19702chr1:223899422-223907008CD4p_CD25-_Il17p_PMAstim_Th17
SE_23408chr1:223899450-223902270Colon_Crypt_1
SE_24051chr1:223899535-223901916Colon_Crypt_2
SE_25230chr1:223899578-223902311Colon_Crypt_3
SE_26209chr1:223899230-223905388Duodenum_Smooth_Muscle
SE_26925chr1:223899336-223904834Esophagus
SE_31491chr1:223898405-223906097Gastric
SE_33950chr1:223900271-223904290HCC1954
SE_34545chr1:223899419-223904575HCT-116
SE_34979chr1:223899218-223904777HeLa
SE_36294chr1:223899426-223904613HMEC
SE_37129chr1:223899390-223911201HSMMtube
SE_38254chr1:223899363-223904539HUVEC
SE_38957chr1:223899577-223902313IMR90
SE_41495chr1:223899335-223902135Left_Ventricle
SE_42269chr1:223899365-223902112Lung
SE_44530chr1:223900206-223905349NHDF-Ad
SE_44904chr1:223899464-223902190NHLF
SE_45872chr1:223899383-223910101Osteoblasts
SE_49408chr1:223899479-223901876Right_Atrium
SE_50365chr1:223899342-223907084Sigmoid_Colon
SE_51879chr1:223899648-223902193Skeletal_Muscle_Myoblast
SE_53249chr1:223899545-223902028Small_Intestine
SE_55958chr1:223898795-223906601u87
SE_58098chr1:223900170-223900759VACO_9m
SE_63671chr1:223899648-223902254HSMM
SE_64794chr1:223900231-223904926NHEK
SE_65644chr1:223899375-223901874Pancreatic_islets
SE_67677chr1:223898795-223906601u87
SE_68376chr1:223892363-223922876TC32
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr1223902180223902241
chr1223901276223901546
Enhancer Sequence
TAGGAAGCGC GCGGCAGGAC GCGGGCAGGG CGGGGTGCCG GGCAGGGCGG GGTGCAGGCC 60
GGCCCGCGGC GCGCTGGGGC GGGGGGCAGC CCGGGTGCTG CAGTGGGGAA GCCGCAAGCC 120
AGGACCTCGC AGTCCTGCGA CACCTCCGCG CCGCCAGAGC CCGGGACTCT GTTCGAGCGT 180
GGGGGGACTC CCGGGGCCTT CCCTCTCTTC CACCCACCAC GCTTTCCTGG GCGGGTCGAG 240
GCGAATCACT GCCCTCAGAT CCCACTAGCA GGCCACTTTA GGACTTCACA AAAACTCAGG 300
GTGATGCAGG AGGCCGGGGT GAAACTTTGA TTGGACTCTA GCGGGGAGCT GGAAGGGAAG 360
GGGAATCGGG TCTGCAGGGA AGGGACGGTG AGAGGCAGCA TCTACCAGAC AAAGTCCGTC 420
TCCAACTGGG GTTCTGTCTG TTCATGGAGG GGGACAGGCC ATAGCCTGGT CATTTTGTGA 480
CTAAGGATAG TCTCCTGCAG CCCTGGGGTT AGATTTATTT TTCCAAAGGG GAGCCAGCGA 540
TACCTCCTCA TAACATTGAC ACTGGTAATT AACCCAGGAC ACGGAGGTGT CTCATGGTTT 600
CCCTGGCGGG AATCACCCGG GAAACCTCCG GGAGCCCTCC AGACCCCCTT ATCCCGTCCC 660
CCAGGGTCTC TGACCTCCCG GCCCTGGGAC AACTTGTGCT CCCCAATCTA CTTGTCCATT 720
CTGTTTCTTG GGGAACCCCT GAGGCTCCTC CTCCTTTGGG ACACTTCCCC AGGCTTCCCC 780
TACCACGCCT AGGAAAGCCT GCCCTGAAGT CCAACTTCTA GATTCCTGTT GTGAGAACAA 840
GGCTTCCAGC TCTGCTTCCA CACCCAGCAG CCTCCCAGGT CACCTTCTGT TACCCTAAAT 900
CCAGCCCATA GGTAGCAAGG GCTGCAGGAA GCGCCCTAGC CCAGACTCAG AGCACTTGGG 960
TTCTTCTTCT TGCTAACCTG CTGGTGACCT TGAACGAGCC ATTTAACCTC TCTGTGCCTC 1020
CATGTCTTCA TCTAAAAGAA AACATGCTGC CTAAATATTT TCTCTCTTTT GTGGCCCACT 1080
AGGCCCTGCC GTCATGGCCT CCTTTCAGTC TCTCAAAGAG CCGGTTCTTT CCTGCATGAG 1140
GCCTTCTCAC CAGCAAGGCA CGCTGTTACC TGGAGTGTGG CTCACTCTCA TTCTTCCCAA 1200
CTTAGTCACA TGTTCCCTTC CTAAAGAGGT CTTTTCTGAC CCTTCTTAGC AGCCACCTCC 1260
CCACCTTGTT TTTCTCTGTC ACCCCACTCA TTTCCTTCAT AGCATTGTCA CAGTTTAGAA 1320
TATAATCACA TGTATTTGTT CTTCCTACTG AACTGCAGGA ATCATGTGTA TATTATTTAC 1380
CAGTATATCC CCAGTGCCTG ACACATAACC ATGCCTTTCA CAGTATTCAT TCATTCATTC 1440
ATTCATTCAT TTACTCACTC ATTTGACAAC ACTGATTGAG CACCTGTTAC ATGCCAGGCA 1500
CTGTCCTGAG AGCTCAGGAG ATACACCAGT GAACACAAAA GAAGTGACTG TTTGTAGAAT 1560
ATGGATGCAG GATTGTAATG TGCCTCAAAT GAAATTATGG TTGTGAAAGT GATACGCTGA 1620
CCTGACTCAG TGCCTCACAC CTGTAATCCC AGCACTATGG GAGGCCAAGG TGGGAGGATC 1680
GCTTGAGCCA GGAGTTCAAG ACCAGCCTGG 1710