Tag | Content |
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EnhancerAtlas ID | HS173-01074 |
Organism | Homo sapiens |
Tissue/cell | SH-SY5Y |
Coordinate | chr1:198644820-198646160 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RORA | MA0071.1 | chr1:198646024-198646034 | ATCAAGGTCA | + | 6.02 |
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| Number of super-enhancer constituents: 35 | ID | Coordinate | Tissue/cell |
SE_09213 | chr1:198635872-198655696 | CD14 | SE_10200 | chr1:198645212-198655760 | CD19_Primary | SE_10874 | chr1:198579403-198671825 | CD20 | SE_11822 | chr1:198641583-198659594 | CD3 | SE_12868 | chr1:198644808-198645704 | CD34_Primary_RO01480 | SE_14382 | chr1:198640936-198657701 | CD4_Memory_Primary_7pool | SE_15405 | chr1:198645022-198653101 | CD4_Memory_Primary_8pool | SE_15805 | chr1:198643633-198645531 | CD4_Naive_Primary_7pool | SE_15805 | chr1:198645559-198652877 | CD4_Naive_Primary_7pool | SE_16283 | chr1:198644729-198655705 | CD4_Naive_Primary_8pool | SE_16874 | chr1:198641765-198654513 | CD4p_CD225int_CD127p_Tmem | SE_17305 | chr1:198604496-198661531 | CD4p_CD25-_CD45RAp_Naive | SE_17776 | chr1:198639811-198661458 | CD4p_CD25-_CD45ROp_Memory | SE_18245 | chr1:198640214-198661625 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19200 | chr1:198644405-198653286 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_19995 | chr1:198643678-198661190 | CD56 | SE_20746 | chr1:198641824-198645379 | CD8_Memory_7pool | SE_21460 | chr1:198645185-198654564 | CD8_Naive_7pool | SE_21924 | chr1:198643564-198657909 | CD8_Naive_8pool | SE_22285 | chr1:198604395-198665148 | CD8_primiary | SE_25576 | chr1:198643754-198654631 | DND41 | SE_31026 | chr1:198644521-198648451 | Fetal_Thymus | SE_39433 | chr1:198644242-198645519 | Jurkat | SE_39433 | chr1:198645558-198648110 | Jurkat | SE_46430 | chr1:198645462-198647113 | Osteoblasts | SE_49861 | chr1:198641770-198648291 | RPMI-8402 | SE_58290 | chr1:198564715-198671046 | Ly1 | SE_59080 | chr1:198588455-198654514 | Ly3 | SE_59608 | chr1:198585244-198671628 | Ly4 | SE_60444 | chr1:198588133-198656098 | DHL6 | SE_61004 | chr1:198588339-198656148 | HBL1 | SE_61429 | chr1:198565046-198658062 | Toledo | SE_62210 | chr1:198565497-198666528 | Tonsil | SE_66263 | chr1:198644242-198645519 | Jurkat | SE_66263 | chr1:198645558-198648110 | Jurkat |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I198660 | chr1 | 198629438 | 198661503 |
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Enhancer Sequence | TATAAAAGTA TGCTGGTAAA CTGATCACTT GAGAACATAA AGTCAACTTT CCCTGGAAGA 60 GTTTCTCATT ATAAAAGAAA GGCAAGCATC TTCTTCCTAA TATCTAGCTT TATCAGGTCA 120 GGGGCTATAT TCTCGGAAGG GATAAGTAAT TTCTGTTGTA TCTACTAATT TCATTTAAAA 180 AGATAACTAG AGAATATTGG AAGCATTATT GTAGAACTGT GTCAAAGACC GAAATATCAT 240 TCCTACCTTA GACTGTACCT CAAGATCGAA GCTCTGGATG CTATCTGGAA TTAAAATGTT 300 TGCATTAAGT TTAAAACTCA GTAAAATAAA TGTTTGAAAT GAAAACCAGA CCAATAATGA 360 ATAATTTTAC TTAGACCTAC TCTCCAAATG TGCTAAAAGA CTTGTAAAAG TTGTTGTTGT 420 TTTAATAACT AAGTCAAGCC AGTTTTATTT AATTCAATAC ATGGAGTATT AATGCGCTGT 480 ATGAATGCCG AAGGTAGTAT TGGACGCCAC AATCTTTAGG AACCATGCTT CTGAGTTTTA 540 AAATGGTGAC TAGTTTAGCA TAGATTCAAC ATAAGCATTA GGTGTTCTTT TGACATTTGG 600 GAATCAGCCA ATCAACAGGA GGAATAGTAA ATTGAATACG AACTTGAAAG AGACCATGTC 660 TTTTTTTCAT CCAACTGTGA AAAACTTTCT TTGTACAATT GTTAAACTTA AGAAACAGAT 720 GGTAGATCTG TATCAGTCAG TGAGGGGTTT CTGAAGTACT TTTCTGGATG AATGCCAAGA 780 AAATGGGTTT CTGAGACTTG CATGGCTCTG GATTTGTTCT GAGCTGTTTA GTGAAGTGAG 840 GGCTGGCATT CAGAACCCAG GGGAGGGGGA GTAGTCATTC CCATTGCCTT GCATAGAGAT 900 AGAATCACAG GTGACAGGTC ATTGGAAAAT CACTTCTTGA GAGTGGGTAT CTTTATTTTG 960 AGTTGGTATC TTTTTGAGAG TTGGCCACTC ATAAGCCTTG CTTTTGATAA CATTTCTTTA 1020 AATTCCTCCA AGGAACAAGG GGAAGTGCAA AAGGAATACG ATAAAGTGCA GCATTGAATG 1080 AGATAAGCAT ATTCAACTTA AGGGGCACAC TAAATACTGT AATCTGGGAG CATAACTCAG 1140 ATTTCTTTTC TTCTTTGCTC AGTATAAGTT GCATGATCAT AGAAGATTTA TGTAGAAGTC 1200 AGAAATCAAG GTCAAGAGGG TAGGCATATT TAGATTCTTA CCCTATTCAT AATTAACAAT 1260 AAAATAAGAT TTTGTGTCCT GATTCAGAGA ATGGATGGCT CAGTCCTTAT AACCTCTTAA 1320 ATTAGTTTTA TCTATAACTG 1340
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